PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021686862.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 822aa    MW: 89174.4 Da    PI: 6.2452
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021686862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.14.6e-21116171156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  XP_021686862.1 116 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 171
                     688999***********************************************999 PP
2START209.11.7e-653265501206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+ +ep+W +s     e++n +e++++f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t+
  XP_021686862.1 326 ELALSAMDELVKMAQTDEPLWIRSLeggrEILNHEEYMRIFTPCIGmkpsgFVSEASRETGMVIINSLALVETLMDSN-RWAEMFPcmiaRTSTT 419
                     57899*************************************999899******************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vissg      g lqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvS+d  ++ +  + +v +++lpSg+++++++ng+skvtwveh+
  XP_021686862.1 420 DVISSGmggtrnGSLQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPTFVNCRMLPSGCVVQDMPNGYSKVTWVEHA 514
                     ************************************************************999******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++ ++h l+r+l++sg+ +ga++wvatlqrqce+
  XP_021686862.1 515 EYDETQIHRLYRPLISSGMGFGAQRWVATLQRQCEC 550
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 822 aa     Download sequence    
MSFGGFLENG SPGAGGARIV ADIPYTSSNM PAGAIAQPRL ISPSLTKSMF NSPGLSLALQ  60
QPNIDGQGDV ARMAENFEPS GGRRSREEEH ESRSGSDNMD GASGDDQDAA DNPPRKKRYH  120
RHTPQQIQEL EALFKECPHP DEKQRLELSK RLCLETRQVK FWFQNRRTQM KTQLERHENS  180
LLRQENDKLR AENMSLRDAM RNPICSNCGG PAIIGDISLE EQHLRIENAR LKDELDRVCA  240
LAGKFLGRPI SSLASSIGPP MPNSSLELGV GTNGFGGLST VPTTLPLGPD FGGGISGALP  300
VVNQTRPPTA GVTGVDRSFE RSMFLELALS AMDELVKMAQ TDEPLWIRSL EGGREILNHE  360
EYMRIFTPCI GMKPSGFVSE ASRETGMVII NSLALVETLM DSNRWAEMFP CMIARTSTTD  420
VISSGMGGTR NGSLQLMHAE LQVLSPLVPV REVNFLRFCK QHAEGVWAVV DVSIDTIRET  480
SGAPTFVNCR MLPSGCVVQD MPNGYSKVTW VEHAEYDETQ IHRLYRPLIS SGMGFGAQRW  540
VATLQRQCEC LAILMSSAVP TRDHTAITAS GRRSMLKLAQ RMTDNFCAGV CASTVHKWNK  600
LNAGNVDEDV RVMTRKSVDD PGEPPGIVLS AATSVWLPVS PHRLFDFLRD ERLRSEWDIL  660
SNGGPMQEMA HIAKGQDHGN CVSLLRASAM NANQSSMLIL QETCIDAAGS LVVYAPVDIP  720
AMHVVMNGGD SAYVALLPSG FAIVPDGPGS RGSLANPNGP TSNNGGGAAG QHRVSGSLLT  780
VAFQILVNSL PTAKLTVESV ETVNNLISCT VQKIKAALQC ES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein