PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021686863.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 821aa    MW: 89046.2 Da    PI: 6.2452
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021686863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.14.6e-21115170156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++eLe+lF+++++p++++r eL+k+l L++rqVk+WFqNrR+++k
  XP_021686863.1 115 KKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMK 170
                     688999***********************************************999 PP
2START209.11.7e-653255491206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela++a++elvk+a+ +ep+W +s     e++n +e++++f++  +     + +ea+r++g+v+ ++  lve+l+d++ +W e+++    + +t+
  XP_021686863.1 325 ELALSAMDELVKMAQTDEPLWIRSLeggrEILNHEEYMRIFTPCIGmkpsgFVSEASRETGMVIINSLALVETLMDSN-RWAEMFPcmiaRTSTT 418
                     57899*************************************999899******************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vissg      g lqlm aelq+lsplvp R++ f+R+++q+ +g+w++vdvS+d  ++ +  + +v +++lpSg+++++++ng+skvtwveh+
  XP_021686863.1 419 DVISSGmggtrnGSLQLMHAELQVLSPLVPvREVNFLRFCKQHAEGVWAVVDVSIDTIRETSGAPTFVNCRMLPSGCVVQDMPNGYSKVTWVEHA 513
                     ************************************************************999******************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++ ++h l+r+l++sg+ +ga++wvatlqrqce+
  XP_021686863.1 514 EYDETQIHRLYRPLISSGMGFGAQRWVATLQRQCEC 549
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 821 aa     Download sequence    
MSFGGFLENG SPGAGGARIV ADIPYTSSNM PAGAIAQPRL ISPSLTKSMF NSPGLSLALQ  60
PNIDGQGDVA RMAENFEPSG GRRSREEEHE SRSGSDNMDG ASGDDQDAAD NPPRKKRYHR  120
HTPQQIQELE ALFKECPHPD EKQRLELSKR LCLETRQVKF WFQNRRTQMK TQLERHENSL  180
LRQENDKLRA ENMSLRDAMR NPICSNCGGP AIIGDISLEE QHLRIENARL KDELDRVCAL  240
AGKFLGRPIS SLASSIGPPM PNSSLELGVG TNGFGGLSTV PTTLPLGPDF GGGISGALPV  300
VNQTRPPTAG VTGVDRSFER SMFLELALSA MDELVKMAQT DEPLWIRSLE GGREILNHEE  360
YMRIFTPCIG MKPSGFVSEA SRETGMVIIN SLALVETLMD SNRWAEMFPC MIARTSTTDV  420
ISSGMGGTRN GSLQLMHAEL QVLSPLVPVR EVNFLRFCKQ HAEGVWAVVD VSIDTIRETS  480
GAPTFVNCRM LPSGCVVQDM PNGYSKVTWV EHAEYDETQI HRLYRPLISS GMGFGAQRWV  540
ATLQRQCECL AILMSSAVPT RDHTAITASG RRSMLKLAQR MTDNFCAGVC ASTVHKWNKL  600
NAGNVDEDVR VMTRKSVDDP GEPPGIVLSA ATSVWLPVSP HRLFDFLRDE RLRSEWDILS  660
NGGPMQEMAH IAKGQDHGNC VSLLRASAMN ANQSSMLILQ ETCIDAAGSL VVYAPVDIPA  720
MHVVMNGGDS AYVALLPSGF AIVPDGPGSR GSLANPNGPT SNNGGGAAGQ HRVSGSLLTV  780
AFQILVNSLP TAKLTVESVE TVNNLISCTV QKIKAALQCE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein