PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686908.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 309aa MW: 34164.4 Da PI: 7.0423

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv ++k+ G g+W++ ++ g+ R++k+c++rw +yl XP_021686908.1 14 KGPWTPEEDEILVSYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	48	2.8e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++l ++++ lG++ W++Ia+ ++ gRt++++k+ w+++l XP_021686908.1 67 RGPFTLEEEKLVIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence
MGRTPCCDKR GLKKGPWTPE EDEILVSYIK KNGHGSWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF TLEEEKLVIQ LHGILGNRWA AIASQLPGRT DNEIKNLWNT HLKKRLLCMG 120 LDSQTHEPFT SCGPAIKAPA SPATRHMAQW ESARLEAEAR LSMESSLFNP PTPGKTDNDY 180 FLRMWNSEVG DSFRKFNRAD KTTCQSPASA SQASSSTKCG SVSAVTVDIS PNLAGYSTTA 240 SNQNEDMECK SCKSHAEDLN AGSDSSSSIE LEDSSDSTLQ LLLDFPINND MSFLEGNVDS 300 YATYSVMQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	1e-122	MYB family protein