PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021686927.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 226aa    MW: 24645.4 Da    PI: 6.3785
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021686927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.31.5e-3971071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+++Cv+apyf++eq + +fa++hk+FGasnv+kll++lp ++r +a+ ++ yeA+ar++dP+yG+v++i++lqqq+++l+a+l
  XP_021686927.1   7 PCGACKFLRRKCVRGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLQAQL 101
                     7*************************89******************************************************************* PP

          DUF260  95 allkee 100
                     a+lke+
  XP_021686927.1 102 ASLKEQ 107
                     *99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MTGSGPPCGA CKFLRRKCVR GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLAHLPVSD  60
RCEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVMNLQAQ LASLKEQAAQ SLLNGSAAAN  120
PNEKYYGKPA SLPQDLQSWF QPENSNMVPQ FNPSLSTGNT TYGENGFMDP YSVGSYGNSS  180
TSTSFDSFEE ASHSISSLDM QTDKKQWTCQ DSDDLRSVAF GYIQHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.11e-71LBD family protein