PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021686961.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 264aa MW: 30040.7 Da PI: 6.234

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021686961.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ + +G +W+t+++ g++R++k+c++rw +yl XP_021686961.1 14 KGPWTAEEDKKLVNFILTHGQCCWRTVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.2	1.2e-15	72	111	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + E+ l +d++++lG++ W++Ia++++ gRt++++k++w+++ XP_021686961.1 72 EAEERLVIDLHARLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111 679************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MGRQPCCDKF GVKKGPWTAE EDKKLVNFIL THGQCCWRTV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL NEAEERLVID LHARLGNRWS KIAARLPGRT DNEIKNHWNT HIKKKLIKMG 120 IDPVTHEPLQ KQNNPEAAPC NNIIYDHQPN FNGDQHDIPN NICAQAASFS SSSSDNSSIT 180 PTESSDPHSD DDPLMSYILS DTFLEDSSTW NFPVTREEYC EFGMSSLEGN SPWFLELKDL 240 GDDYFGLGRF NDADLSVLDM SDKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	1e-86	MYB family protein