PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687363.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 686aa MW: 75807 Da PI: 6.5996

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687363.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	328	387	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021687363.1 328 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 387 78*****************988886678446***********************98 PP
2	AP2	45.6	1.8e-14	432	481	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_021687363.1 432 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 481 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MKSMNDNNNG SNNNWLGFSL SPHMKMEVAS DPQHHHRQYH HESQAPSTAV VGVSSAVPTS 60 FYLSSSHFNS PGICYGVGEN VGFHSPLSVM PLKSDGSLCI LEALTRSQPE GMVPSSPPKL 120 EDFLGGATME THQYGTHERE TMALSLDSMY YHQNTEPESN RNNSVDLHEP YRQQDQQFSI 180 QTHPYYSEIA CHGMYQDSLE EATKDTQLAD CDSQIPHMED EEMPCLKNWV ARQYSTHNAL 240 EQQLNSSMVD DGGASGSVGP ISCGDLQSLS LSMSPGSQSS CVTAPRQISP TGNECIMAME 300 TKKRGSAKVG QKQPVHRKSI DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG 360 RQVYLGGYDM EEKAARAYDL AALKYWGPST HINFPLENYQ EELEEMKNMS RQEYVAHLRR 420 KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR 480 GVNAVTNFDI TRYDVERIMA SSTLLAGELA RRNKETETSN GAIEYNPPAQ NSGESIQIPN 540 SNGSDWKVAL YESPQRPQPN ACVDSLDHKS TSVGIYRSSS YSMAMQDLIG IDSVNCSQPA 600 VMDESAARLG THASNTSSLV TSLSSSREAS PDKTGTTMLF AKPPVASKFI NPASGVTPWF 660 QTAAAQLRPA AISMGHLPVF AAWNDT

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MKSMNDNNNG SNNNWLGFSL SPHMKMEVAS DPQHHHRQYH HESQAPSTAV VGVSSAVPTS  60
FYLSSSHFNS PGICYGVGEN VGFHSPLSVM PLKSDGSLCI LEALTRSQPE GMVPSSPPKL  120
EDFLGGATME THQYGTHERE TMALSLDSMY YHQNTEPESN RNNSVDLHEP YRQQDQQFSI  180
QTHPYYSEIA CHGMYQDSLE EATKDTQLAD CDSQIPHMED EEMPCLKNWV ARQYSTHNAL  240
EQQLNSSMVD DGGASGSVGP ISCGDLQSLS LSMSPGSQSS CVTAPRQISP TGNECIMAME  300
TKKRGSAKVG QKQPVHRKSI DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG  360
RQVYLGGYDM EEKAARAYDL AALKYWGPST HINFPLENYQ EELEEMKNMS RQEYVAHLRR  420
KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR  480
GVNAVTNFDI TRYDVERIMA SSTLLAGELA RRNKETETSN GAIEYNPPAQ NSGESIQIPN  540
SNGSDWKVAL YESPQRPQPN ACVDSLDHKS TSVGIYRSSS YSMAMQDLIG IDSVNCSQPA  600
VMDESAARLG THASNTSSLV TSLSSSREAS PDKTGTTMLF AKPPVASKFI NPASGVTPWF  660
QTAAAQLRPA AISMGHLPVF AAWNDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-132	AP2 family protein