PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687368.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 264aa MW: 29438.2 Da PI: 8.1534

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.4	2.8e-19	120	174	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q +Le+ F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k XP_021687368.1 120 RKKLRLTKQQSATLEDSFKEHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTK 174 78889************************************************98 PP
2	HD-ZIP_I/II	123.9	7.4e-40	120	208	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+k+q+++LE+sF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eL+ + XP_021687368.1 120 RKKLRLTKQQSATLEDSFKEHSTLNPKQKQALAEQLNLRPRQVEVWFQNRRARTKLKQTEVDCEVLKKCCETLTEENKRLQKELQELK-S 208 69*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MSFGISDGVC NTGLGLGLSC HDKQQNCSQS DHHLQQKKKR LSLKYDHMFP SLTLGLPQEP 60 YPSAAKVEAD LQPQVSSPSA VSSFSNNSSI KKEREFGGEE VEVERVSSRV SDEDEEGSPR 120 KKLRLTKQQS ATLEDSFKEH STLNPKQKQA LAEQLNLRPR QVEVWFQNRR ARTKLKQTEV 180 DCEVLKKCCE TLTEENKRLQ KELQELKSLK LAAPLYMQLP AATLTMCPSC ERINSGGDAS 240 STSTLTVGPK PHFYSPFTHP SAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	177	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-62	HD-ZIP family protein