PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687423.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 888aa MW: 97688.8 Da PI: 7.529

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.1	3.2e-18	331	431	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g+ W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_021687423.1 331 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKDWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 423 99************************555567778***********99899999999.*******************876.7777 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_021687423.1 424 LVMGFRKA 431 88877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 888 aa Download sequence
MRELILRMKS KTCMNAVCGA STSSGSRKGW PLRSGDFANL CDKCGSAYEQ SIFCDIFHSK 60 DSGWRDCASC GKRLHCGCIA SIFLLELLDH GGGVNCVSCT KSSGVNSVMG SEKPNGFGTS 120 KGDDIGEMQS ADTQLDGERK LMQLGCTPEG IGTIHLLQLQ NGETSGSFRQ MKQEDNIPPV 180 GEIGITSFSN FNQASNGLSQ TAKPEIHKAT IAAKELYESL AQTNLSMTLG TPLGNPNPFP 240 GAVVDERGQS KALSPFQQGP RSRHLLPKPP KSALGTGLES NAGMVSQIRV ARPPTEGRGR 300 NQLLPRYWPR ITDQELQQIS ADANSTVVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPPI 360 SQPEGLPLRI QDVKGKDWVF QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRMDP 420 EGKLVMGFRK ASNNMAMQSL KGSSDTHLSA LSKHLHSTNG DISWHTSEKH EERMRESLLL 480 PSLLVPERKR TRNIGSKSKR LLIDSLDSLE LKLTWEEAQD LLRPPPSVKP SIVTIEDHDF 540 EEYEEPPVFG KRTIFVVRSI GGQEQWAQCD SCCKWRRLPV DVLLPPKWTC VDNAWDQSRC 600 SCSAPDELSP RELEHLLRLN KEFKKRRMLS IHRPAQEHKS SGLDALANAA ILGDAGDPGT 660 TVVATTTKHP RHRPGCSCIV CIQPPSGKGK HKPTCTCTVC MTVKRRFKTM MMRKKKRQSE 720 HEAEIALRDQ NMSGPRDEAE VESSSKLVST PQDPSENEDR LANELEPKSQ SNNLLNKMID 780 IGKGHIDLNC HPAREEESQV GLARMSMLSL LQVASLPLDT YLKQNGLTSL VSEQQGSSAS 840 QMPAQAGESE GRLPEDCQFV SAVQEQKQES GGEENRGPGP EQSQNDPV

Sequence ? help Back to Top

Protein Sequence Length: 888 aa Download sequence

MRELILRMKS KTCMNAVCGA STSSGSRKGW PLRSGDFANL CDKCGSAYEQ SIFCDIFHSK  60
DSGWRDCASC GKRLHCGCIA SIFLLELLDH GGGVNCVSCT KSSGVNSVMG SEKPNGFGTS  120
KGDDIGEMQS ADTQLDGERK LMQLGCTPEG IGTIHLLQLQ NGETSGSFRQ MKQEDNIPPV  180
GEIGITSFSN FNQASNGLSQ TAKPEIHKAT IAAKELYESL AQTNLSMTLG TPLGNPNPFP  240
GAVVDERGQS KALSPFQQGP RSRHLLPKPP KSALGTGLES NAGMVSQIRV ARPPTEGRGR  300
NQLLPRYWPR ITDQELQQIS ADANSTVVPL FEKVLSASDA GRIGRLVLPK ACAEAYFPPI  360
SQPEGLPLRI QDVKGKDWVF QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRMDP  420
EGKLVMGFRK ASNNMAMQSL KGSSDTHLSA LSKHLHSTNG DISWHTSEKH EERMRESLLL  480
PSLLVPERKR TRNIGSKSKR LLIDSLDSLE LKLTWEEAQD LLRPPPSVKP SIVTIEDHDF  540
EEYEEPPVFG KRTIFVVRSI GGQEQWAQCD SCCKWRRLPV DVLLPPKWTC VDNAWDQSRC  600
SCSAPDELSP RELEHLLRLN KEFKKRRMLS IHRPAQEHKS SGLDALANAA ILGDAGDPGT  660
TVVATTTKHP RHRPGCSCIV CIQPPSGKGK HKPTCTCTVC MTVKRRFKTM MMRKKKRQSE  720
HEAEIALRDQ NMSGPRDEAE VESSSKLVST PQDPSENEDR LANELEPKSQ SNNLLNKMID  780
IGKGHIDLNC HPAREEESQV GLARMSMLSL LQVASLPLDT YLKQNGLTSL VSEQQGSSAS  840
QMPAQAGESE GRLPEDCQFV SAVQEQKQES GGEENRGPGP EQSQNDPV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	704	715	KRRFKTMMMRKK
2	704	717	KRRFKTMMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein