PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687633.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 211aa MW: 24554 Da PI: 8.8868

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.5	5.2e-19	57	110	4	57
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++++ ++q++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ XP_021687633.1 57 KRKLRADQVNLLEMNFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKN 110 557889**********************************************95 PP
2	HD-ZIP_I/II	116	2.2e-37	56	147	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+l ++qv+lLE++F +e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+a+++ e++rLe+ev +L+e+l+e XP_021687633.1 56 KKRKLRADQVNLLEMNFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKNKKLEEEYTKLKTAHESNIVEKCRLESEVLKLKEQLSE 147 9****************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MTTTMNLSKV DQDHMVLLSQ LYPGVYPQMV PQQGEPKPRR RRKKNKGGEN GVTVAKKRKL 60 RADQVNLLEM NFGNEHKLES ERKDKLASEL GLDPRQVAVW FQNRRARWKN KKLEEEYTKL 120 KTAHESNIVE KCRLESEVLK LKEQLSEAEK EIQRLTERVD GVSSNSSSST LSMEAMDTPF 180 LGEFGMEGYG DFFYMPETNY IHGMEWFNLY V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	39	58	RRRRKKNKGGENGVTVAKKR
2	39	59	RRRRKKNKGGENGVTVAKKRK
3	40	59	RRRRKKNKGGENGVTVAKKR
4	40	60	RRRRKKNKGGENGVTVAKKRK
5	41	61	RRRRKKNKGGENGVTVAKKRK
6	42	62	RRRRKKNKGGENGVTVAKKRK
7	56	85	KKRKLRADQVNLLEMNFGNEHKLESERKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	7e-61	HD-ZIP family protein