PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687678.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 557aa MW: 61626.4 Da PI: 8.8133

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687678.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.8e-17	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l XP_021687678.1 59 KGGWTPEEDETLRNAVAAFKGKSWKKIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	56.7	5.5e-18	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+++ +v+++G+ W+ Ia+ ++ gR +kqc++rw+++l XP_021687678.1 111 KGPWTQEEDDKITVLVAKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	57.3	3.7e-18	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l +a++++G++ W+ Ia+ ++ gRt++++k++w++ XP_021687678.1 163 KDAWTLEEELELMNAHRKHGNK-WAEIAKVLP-GRTDNSIKNHWNS 206 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MGEVKIEECC LENKQLTAAS SSSISEGSGS AILKSPGVSS PATASPTHRR TTGPIRRAKG 60 GWTPEEDETL RNAVAAFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD 120 KITVLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELELMNAHRK 180 HGNKWAEIAK VLPGRTDNSI KNHWNSSLKK KLDFYLATGK LPPVVKNDIV FSSRKHPSVA 240 KNSIQDGSKD TNKPAVTKTS KESDSTARTS SGTTDACKLE EDGKDQLESV ALVRDMAASS 300 SVFPNESADS VGVECKPHSF VADLSCCDSE SLRKCENYRI NYEISEEKVF GSQLQFETST 360 YGPLYYEPPL LETCTPIDLN PLVMRQVQHE YSSSPISSPI SFFTPPCVKS SHLSAQSPES 420 ILRTAAKSYP NTPSIFRKRK TGSQVHLLPA KVGKVGQECV EDRLQRRTEN TSEKAGSQDK 480 NLFDSPHPDN STSLPNGKAF NASPPYRLKS KRTAVFKSVE RQLEFTLDKE RCDSTKSVNG 540 SALVSEGCPH ATKMGVT

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MGEVKIEECC LENKQLTAAS SSSISEGSGS AILKSPGVSS PATASPTHRR TTGPIRRAKG  60
GWTPEEDETL RNAVAAFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPDLV KGPWTQEEDD  120
KITVLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLEE ELELMNAHRK  180
HGNKWAEIAK VLPGRTDNSI KNHWNSSLKK KLDFYLATGK LPPVVKNDIV FSSRKHPSVA  240
KNSIQDGSKD TNKPAVTKTS KESDSTARTS SGTTDACKLE EDGKDQLESV ALVRDMAASS  300
SVFPNESADS VGVECKPHSF VADLSCCDSE SLRKCENYRI NYEISEEKVF GSQLQFETST  360
YGPLYYEPPL LETCTPIDLN PLVMRQVQHE YSSSPISSPI SFFTPPCVKS SHLSAQSPES  420
ILRTAAKSYP NTPSIFRKRK TGSQVHLLPA KVGKVGQECV EDRLQRRTEN TSEKAGSQDK  480
NLFDSPHPDN STSLPNGKAF NASPPYRLKS KRTAVFKSVE RQLEFTLDKE RCDSTKSVNG  540
SALVSEGCPH ATKMGVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-165	MYB family protein