PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021687701.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family HD-ZIP
Protein Properties Length: 705aa    MW: 77536.9 Da    PI: 6.6328
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021687701.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.85e-203085156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ +++t++q++ Le++F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_021687701.1 30 KKRYHRHTANQIQNLEAMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 85
                    678899***********************************************998 PP
2START178.44.3e-562194402206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     +a  a++el+++ + +ep+W ks+    + +  d++ ++f++s +       ++e++r+sgvv+ ++  lv  ++d + +W e ++     a+tl
  XP_021687701.1 219 IAANAMDELLRLLQTDEPLWIKSPtdgrDVLHLDTYQTIFPRSISrlknpnVRIETSRDSGVVITNSLALVDMFMDAN-KWVELFPtivsVAKTL 312
                     67889********************9999999999*****999999999999**************************.******99999***** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     evissg      g lqlm+ elq+lsplvp R+f+++Ry++q ++g w+iv vS d +q+ ++      +++lpSg++i++++ng+skvtwve+v
  XP_021687701.1 313 EVISSGmlgshgGSLQLMYEELQVLSPLVPtREFYILRYCQQIEQGLWAIVNVSYDIPQFASQ----CQSRRLPSGCMIQDMPNGYSKVTWVENV 403
                     ************************************************************995....67778*********************** PP

                     E--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     + ++++p h  +r lv+sg+a+ga +w+atlqr+ce+
  XP_021687701.1 404 EIEDKTPtHRFYRDLVHSGMAFGAERWLATLQRLCER 440
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 705 aa     Download sequence    
MEYGSVGGGS GGGGSASGGD HDPSDPQRRK KRYHRHTANQ IQNLEAMFKE CPHPDEKQRL  60
QLSRELGLAP RQIKFWFQNR RTQMKAQHER ADNCALRAEN DKIRCENIAI REALKNVICP  120
SCGGPPVTED SFFDEHKLRM ENAHLKEELD RVSSIAAKYI GRPISHLPPV QPIHFSSLDL  180
SMGSFGGPSL DLDLIPSTSN LPFHPLGISD MDKPLMTDIA ANAMDELLRL LQTDEPLWIK  240
SPTDGRDVLH LDTYQTIFPR SISRLKNPNV RIETSRDSGV VITNSLALVD MFMDANKWVE  300
LFPTIVSVAK TLEVISSGML GSHGGSLQLM YEELQVLSPL VPTREFYILR YCQQIEQGLW  360
AIVNVSYDIP QFASQCQSRR LPSGCMIQDM PNGYSKVTWV ENVEIEDKTP THRFYRDLVH  420
SGMAFGAERW LATLQRLCER FACLTVSGTS TPDLGGVIPS PDGKRSMMKL AQRMVNSFCA  480
SISTSNSHRW TTVSGSNEVG VRVHKSTDPG QPNGVVLNAA TTFWLPVSPQ NVFNFFKDER  540
TRPQWDVLSS GNAVQEVAHI ANGSHPGNCI SVLRAFNTGQ NNMLILQESC MDESGSLVVY  600
CPVDLPAINI VMSGEDPSYI PLLPSGFTIS PDGRPDNGNG ASSSSSTHAS MGRSSGSLIT  660
VSFQILVSSL PSAKLNLESV TTVNNLISTT VQQIKAAMNC PSSSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein