PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021687833.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 251aa    MW: 28334.5 Da    PI: 9.9305
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021687833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.42.6e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++ Ed+ l++++k++G g W+  +r+ g++R++k+c++rw++yl
   XP_021687833.1 14 RGAWSASEDKVLINYIKLHGEGKWRDLPRRAGLKRCGKSCRLRWLNYL 61
                     89********************************************97 PP
2Myb_DNA-binding491.4e-1567111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ 
   XP_021687833.1  67 RGNISVDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSN 111
                      788999****************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MGRRPCCAKE GVKRGAWSAS EDKVLINYIK LHGEGKWRDL PRRAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI SVDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS NLRKRVKGEK  120
GSRCSSKLRF DNLSKKKNSP PPPPPGAVQT KPVTCSKVVI IPQALEKEQV IQKKAESKRT  180
PSCSALQQED SSLDLDFDID DFLLLEAPNS ELDQAKLNIN GNALGPGDYG LNNLSSCWPE  240
FPVSTVDSFY Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.18e-61MYB family protein