PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687838.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 890aa MW: 98301.8 Da PI: 6.9372

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687838.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.5	1.2e-18	297	397	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_021687838.1 297 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 389 99************************555567778***********99899999999.*******************876.7777 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_021687838.1 390 LVMGFRKA 397 88877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 890 aa Download sequence
MESKTCMNAL CGASTSSGWR KGWPLRSGVF ANLCDKCGSA YELSIFCDMF HSKDSGWREC 60 ASCGKRLHCG CIASIFLLEL LDHGGGVNCM SCTKSSGVNS FADQLDGERK LMQFGRITEG 120 IGTRHLLQLQ NEETSGSFWQ VKQDDNAPPM GEIGSTSFSN FNRASNGAKP EIHKTTIATK 180 ELYESLAQTN LSITLGSPLG NPNPFPAAVV DERVQNKALS PLQQGPRSRH LLPKPPKSAL 240 ATGLESNAGM VSQIRVARPP AEGRGRNQLL PRYWPRITDQ ELQQISADSN STIVPLFEKV 300 LSASDAGRIG RLVLPKACAE AYFPPISQPE GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV 360 LEGVTPCIQS MQLQAGDTVT FSRMDPEGKL VMGFRKASNN MAMQDIPSAI PNGVHSSESF 420 FSGVFENLPI VSGYSGLLQS IKGSTDTHLS ALSKHLHSAN GDINWHKSEK HEERTRESLL 480 LPSLLVPERK RTRNIGSKSK RLLIDSLDAL ELKLTWDEAQ DLLRPPSSVK PSIITIEDHD 540 FEEYEEPPVF GKRTIFAVRS TGGQEQWAQC DSCCKWRRLP VDILLPPKWT CVDNAWDQSR 600 CSCSAPEELT PRELENLLRL SNDFKKRRMT SINRPSQENE PSDLDALANA AILGDEGDPG 660 TTAVATTTKH PRHRPGCSCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT MMMRKKKRQS 720 EREAEIAQRN QHVSGPRDEA EVESSSKHVS TPQDPSENEA RSANEFESKS QSNNLSNKMV 780 DTGKGHIDLN CDPDREEESQ VGLNHMSMMS LLQVASLPLD TYLKQNGLTS LVSERQGSSA 840 SHVPPQPGES EGQLPEDCQF GTVVQEQEKQ ESAGEENYGP GPKQSQNDPV

Sequence ? help Back to Top

Protein Sequence Length: 890 aa Download sequence

MESKTCMNAL CGASTSSGWR KGWPLRSGVF ANLCDKCGSA YELSIFCDMF HSKDSGWREC  60
ASCGKRLHCG CIASIFLLEL LDHGGGVNCM SCTKSSGVNS FADQLDGERK LMQFGRITEG  120
IGTRHLLQLQ NEETSGSFWQ VKQDDNAPPM GEIGSTSFSN FNRASNGAKP EIHKTTIATK  180
ELYESLAQTN LSITLGSPLG NPNPFPAAVV DERVQNKALS PLQQGPRSRH LLPKPPKSAL  240
ATGLESNAGM VSQIRVARPP AEGRGRNQLL PRYWPRITDQ ELQQISADSN STIVPLFEKV  300
LSASDAGRIG RLVLPKACAE AYFPPISQPE GLPLRIQDVK GKEWVFQFRF WPNNNSRMYV  360
LEGVTPCIQS MQLQAGDTVT FSRMDPEGKL VMGFRKASNN MAMQDIPSAI PNGVHSSESF  420
FSGVFENLPI VSGYSGLLQS IKGSTDTHLS ALSKHLHSAN GDINWHKSEK HEERTRESLL  480
LPSLLVPERK RTRNIGSKSK RLLIDSLDAL ELKLTWDEAQ DLLRPPSSVK PSIITIEDHD  540
FEEYEEPPVF GKRTIFAVRS TGGQEQWAQC DSCCKWRRLP VDILLPPKWT CVDNAWDQSR  600
CSCSAPEELT PRELENLLRL SNDFKKRRMT SINRPSQENE PSDLDALANA AILGDEGDPG  660
TTAVATTTKH PRHRPGCSCI VCIQPPSGKG KHKPTCTCNV CMTVKRRFKT MMMRKKKRQS  720
EREAEIAQRN QHVSGPRDEA EVESSSKHVS TPQDPSENEA RSANEFESKS QSNNLSNKMV  780
DTGKGHIDLN CDPDREEESQ VGLNHMSMMS LLQVASLPLD TYLKQNGLTS LVSERQGSSA  840
SHVPPQPGES EGQLPEDCQF GTVVQEQEKQ ESAGEENYGP GPKQSQNDPV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	705	716	KRRFKTMMMRKK
2	705	718	KRRFKTMMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein