PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021687840.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 871aa MW: 96300.5 Da PI: 6.4632

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021687840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.6	1.2e-18	318	418	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_021687840.1 318 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 410 99************************555567778***********99899999999.*******************876.7777 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++++ XP_021687840.1 411 LVMGFRKA 418 88877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 871 aa Download sequence
MESKTCMNAL CGASTSSGWR KGWPLRSGVF ANLCDKCGSA YELSIFCDMF HSKDSGWREC 60 ASCGKRLHCG CIASIFLLEL LDHGGGVNCM SCTKSSGVNS VMGDEKTNGF STSKVDDICE 120 QFADQLDGER KLMQFGRITE GIGTRHLLQL QNEETSGSFW QVKQDDNAPP MGEIGSTSFS 180 NFNRASNGAK PEIHKTTIAT KELYESLAQT NLSITLGSPL GNPNPFPAAV VDERVQNKAL 240 SPLQQGPRSR HLLPKPPKSA LATGLESNAG MVSQIRVARP PAEGRGRNQL LPRYWPRITD 300 QELQQISADS NSTIVPLFEK VLSASDAGRI GRLVLPKACA EAYFPPISQP EGLPLRIQDV 360 KGKEWVFQFR FWPNNNSRMY VLEGVTPCIQ SMQLQAGDTV TFSRMDPEGK LVMGFRKASN 420 NMAMQDIPSA IPNGVHSSES FFSGVFENLP IHEERTRESL LLPSLLVPER KRTRNIGSKS 480 KRLLIDSLDA LELKLTWDEA QDLLRPPSSV KPSIITIEDH DFEEYEEPPV FGKRTIFAVR 540 STGGQEQWAQ CDSCCKWRRL PVDILLPPKW TCVDNAWDQS RCSCSAPEEL TPRELENLLR 600 LSNDFKKRRM TSINRPSQEN EPSDLDALAN AAILGDEGDP GTTAVATTTK HPRHRPGCSC 660 IVCIQPPSGK GKHKPTCTCN VCMTVKRRFK TMMMRKKKRQ SEREAEIAQR NQHVSGPRDE 720 AEVESSSKHV STPQDPSENE ARSANEFESK SQSNNLSNKM VDTGKGHIDL NCDPDREEES 780 QVGLNHMSMM SLLQVASLPL DTYLKQNGLT SLVSERQGSS ASHVPPQPGE SEGQLPEDCQ 840 FGTVVQEQEK QESAGEENYG PGPKQSQNDP V

Sequence ? help Back to Top

Protein Sequence Length: 871 aa Download sequence

MESKTCMNAL CGASTSSGWR KGWPLRSGVF ANLCDKCGSA YELSIFCDMF HSKDSGWREC  60
ASCGKRLHCG CIASIFLLEL LDHGGGVNCM SCTKSSGVNS VMGDEKTNGF STSKVDDICE  120
QFADQLDGER KLMQFGRITE GIGTRHLLQL QNEETSGSFW QVKQDDNAPP MGEIGSTSFS  180
NFNRASNGAK PEIHKTTIAT KELYESLAQT NLSITLGSPL GNPNPFPAAV VDERVQNKAL  240
SPLQQGPRSR HLLPKPPKSA LATGLESNAG MVSQIRVARP PAEGRGRNQL LPRYWPRITD  300
QELQQISADS NSTIVPLFEK VLSASDAGRI GRLVLPKACA EAYFPPISQP EGLPLRIQDV  360
KGKEWVFQFR FWPNNNSRMY VLEGVTPCIQ SMQLQAGDTV TFSRMDPEGK LVMGFRKASN  420
NMAMQDIPSA IPNGVHSSES FFSGVFENLP IHEERTRESL LLPSLLVPER KRTRNIGSKS  480
KRLLIDSLDA LELKLTWDEA QDLLRPPSSV KPSIITIEDH DFEEYEEPPV FGKRTIFAVR  540
STGGQEQWAQ CDSCCKWRRL PVDILLPPKW TCVDNAWDQS RCSCSAPEEL TPRELENLLR  600
LSNDFKKRRM TSINRPSQEN EPSDLDALAN AAILGDEGDP GTTAVATTTK HPRHRPGCSC  660
IVCIQPPSGK GKHKPTCTCN VCMTVKRRFK TMMMRKKKRQ SEREAEIAQR NQHVSGPRDE  720
AEVESSSKHV STPQDPSENE ARSANEFESK SQSNNLSNKM VDTGKGHIDL NCDPDREEES  780
QVGLNHMSMM SLLQVASLPL DTYLKQNGLT SLVSERQGSS ASHVPPQPGE SEGQLPEDCQ  840
FGTVVQEQEK QESAGEENYG PGPKQSQNDP V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	686	697	KRRFKTMMMRKK
2	686	699	KRRFKTMMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein