PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688016.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 804aa MW: 93950.4 Da PI: 8.2993

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.3	2.1e-12	75	154	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+e+A+ GFsv k++ + r g+ + +t C k k+ k+ ++r++C ak++ ++++g w+++k+ + HnHel p XP_021688016.1 75 NFYKEHARLKGFSVFKRSAVNV-RGGSRKYQTISCDKGRKAIGAKS----------SKRINCPAKINAILRENGMWQISKVISSHNHELEP 154 6************9998877.88889999998777666544..........69*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MAGLSQGRSY RRQLFDEIFD FSEDDSLFAE DVEEDESAGD QDMNEGGIRA VANTNAIEEG 60 PLTGMLFPCI STMFNFYKEH ARLKGFSVFK RSAVNVRGGS RKYQTISCDK GRKAIGAKSS 120 KRINCPAKIN AILRENGMWQ ISKVISSHNH ELEPSMSRLM VAHRSLNMDM KRRLEANDIA 180 GIRPAKSIRL LEVQAGGPEN LSCLSKDCRN FIERKRRLRL GDGDAEAIRK LFVRMQRNDP 240 EFFYSFDLDD DSRLSNVLWV HPRSRAAYEE FNDVVSFDTT YLVNRYKLPF ATIVGVNHHG 300 QSILLGCALI SHEDVNTFKW LFMTWLEAME DVHPNSILTD QCESMRKAIR EVMPNTRHRF 360 CLWHILCKVP EKFKGVTDYD SACLEFKAVI YDSLTIEMFE RNWNEFVVKH GLERNEWLSK 420 LYVDREYWVP IYLNHTFWAG MVSTQRSESM HAYFDGYVNS MSTLKQFVEQ YEIAMCDKNE 480 KEFYADFKSK NTVVNCISVF EWEQQFQKAF TNSIFKLVQE EIKRMWYCHV IQPTEEGRHE 540 ADNEPGIERH KIMEKSIINN WFRREFVYDV EYRENGQYFS CNCKKFESKG ILCCHIMRLL 600 SLKDIKFINE RYLLRRWRKD VNRVHSNKFF HGGYPHMTEE FEKYREMERL FQEASDLAYD 660 DNKIKFVKQR LAELKRDLLS WNDGMIAPTS NAQVTIDTNN VDENEENERV ILNPHVTRSR 720 GRPRINRHRS VREITQRANS GRNRNSGRGR RRGRPRNNIN SNIAEQVGPH NSQTPGSQTQ 780 GNVADAVINP IVSGTIPSHH SIRH

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MAGLSQGRSY RRQLFDEIFD FSEDDSLFAE DVEEDESAGD QDMNEGGIRA VANTNAIEEG  60
PLTGMLFPCI STMFNFYKEH ARLKGFSVFK RSAVNVRGGS RKYQTISCDK GRKAIGAKSS  120
KRINCPAKIN AILRENGMWQ ISKVISSHNH ELEPSMSRLM VAHRSLNMDM KRRLEANDIA  180
GIRPAKSIRL LEVQAGGPEN LSCLSKDCRN FIERKRRLRL GDGDAEAIRK LFVRMQRNDP  240
EFFYSFDLDD DSRLSNVLWV HPRSRAAYEE FNDVVSFDTT YLVNRYKLPF ATIVGVNHHG  300
QSILLGCALI SHEDVNTFKW LFMTWLEAME DVHPNSILTD QCESMRKAIR EVMPNTRHRF  360
CLWHILCKVP EKFKGVTDYD SACLEFKAVI YDSLTIEMFE RNWNEFVVKH GLERNEWLSK  420
LYVDREYWVP IYLNHTFWAG MVSTQRSESM HAYFDGYVNS MSTLKQFVEQ YEIAMCDKNE  480
KEFYADFKSK NTVVNCISVF EWEQQFQKAF TNSIFKLVQE EIKRMWYCHV IQPTEEGRHE  540
ADNEPGIERH KIMEKSIINN WFRREFVYDV EYRENGQYFS CNCKKFESKG ILCCHIMRLL  600
SLKDIKFINE RYLLRRWRKD VNRVHSNKFF HGGYPHMTEE FEKYREMERL FQEASDLAYD  660
DNKIKFVKQR LAELKRDLLS WNDGMIAPTS NAQVTIDTNN VDENEENERV ILNPHVTRSR  720
GRPRINRHRS VREITQRANS GRNRNSGRGR RRGRPRNNIN SNIAEQVGPH NSQTPGSQTQ  780
GNVADAVINP IVSGTIPSHH SIRH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	218	ERKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-107	FAR1 family protein