PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688169.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 619aa MW: 68634 Da PI: 6.4669

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688169.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.4	5.1e-13	450	496	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_021688169.1 450 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 496 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MKIELGMGGG AWNDEDRAMV AAVLGTKAFN YLISNSVSNE NLLMAIGSDE NLQNKLSDLV 60 EHPNASNFSW NYAIFWQISC SKSGDWVLGW GDGSCREPKE GEESEATRIL NLRFEDEIQQ 120 RMRKRVLQKL HTLSGESDED NYALGLDRVT DTEMFFLASM YFSFPRGEGG PGKCFASGKH 180 VWITDALRSG TDYCVRSFLA KSAGIQTIVL VATDVGVVEL GSVRSVPESI LMVQSIRSTF 240 SNHETVTRAK SIVPVSAPCL PVVDEKKDEN SLFSNVGFVE RVEGIPKIFG QDLNNSSHGH 300 GHGFREKLAF RKMEERPSWD VYQNGNRLAF PGNRNGLHGS SWAHNFGLKQ GNPAEVCGSQ 360 NTTNNMQELV NGVREELRLN QFQPQKQVNM QIDFSGATSG PSVVGRPVNV ESEHSDVEAS 420 CKEDRLGTAD DRRPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNISKMD 480 KASLLGDAIA YINELQAKVK LMEAEREKFG NTSREASTLE VNSNGKNHSQ APEVDIQASH 540 DEVIVRVSCP LNLHPASRVI QAFKEAQVSV MDSKLAAANE TVFHTFVIKS QGSEQLTKEK 600 LMAVFSLEPN SLQQLSSVG

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MKIELGMGGG AWNDEDRAMV AAVLGTKAFN YLISNSVSNE NLLMAIGSDE NLQNKLSDLV  60
EHPNASNFSW NYAIFWQISC SKSGDWVLGW GDGSCREPKE GEESEATRIL NLRFEDEIQQ  120
RMRKRVLQKL HTLSGESDED NYALGLDRVT DTEMFFLASM YFSFPRGEGG PGKCFASGKH  180
VWITDALRSG TDYCVRSFLA KSAGIQTIVL VATDVGVVEL GSVRSVPESI LMVQSIRSTF  240
SNHETVTRAK SIVPVSAPCL PVVDEKKDEN SLFSNVGFVE RVEGIPKIFG QDLNNSSHGH  300
GHGFREKLAF RKMEERPSWD VYQNGNRLAF PGNRNGLHGS SWAHNFGLKQ GNPAEVCGSQ  360
NTTNNMQELV NGVREELRLN QFQPQKQVNM QIDFSGATSG PSVVGRPVNV ESEHSDVEAS  420
CKEDRLGTAD DRRPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNISKMD  480
KASLLGDAIA YINELQAKVK LMEAEREKFG NTSREASTLE VNSNGKNHSQ APEVDIQASH  540
DEVIVRVSCP LNLHPASRVI QAFKEAQVSV MDSKLAAANE TVFHTFVIKS QGSEQLTKEK  600
LMAVFSLEPN SLQQLSSVG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	432	440	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein