PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688348.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 314aa MW: 35398.2 Da PI: 4.6036

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.5	5.4e-19	60	113	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_021688348.1 60 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 113 566899***********************************************9 PP
2	HD-ZIP_I/II	128.8	2.2e-41	59	151	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++y+alk + e+L++++e+L +e++e XP_021688348.1 59 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYEALKVNFESLQHDNETLLKEVRE 151 69*************************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MKTLGSSDSL GALMSICPTT DEHSPRNSNH VYGREFHSMS MLESIDEEAC VEESGHGAEK 60 KRRLSVDQVK ALEKNFEVEN KLEPERKVKL AQELGLQPRQ VAVWFQNRRA RWKTKQLERD 120 YGVLKANYEA LKVNFESLQH DNETLLKEVR ELKAKLNEEK TESNVSVKEE IILTESDDKA 180 SEEPPLLASV PASGIKDLNY ESFNSNNNGV LGASLFPDFK DGSSDSDSSA ILNEDNSPNP 240 AISSSTGILQ NHQLMMSPPP ASASSSFQFT KTTTYQTQFV KMEEHNFFSN EEACNFFSDE 300 QAPTLQWYCP DQWN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	60	89	KKRRLSVDQVKALEKNFEVENKLEPERKVK
2	108	116	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	1e-77	HD-ZIP family protein