PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021688428.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 255aa    MW: 29038.9 Da    PI: 6.8738
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021688428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.34.3e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien   rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e+ss
  XP_021688428.1  9 KRIENANSRQVTFSKRRTGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSS 59
                    79***********************************************96 PP
2K-box71.72.2e-24771725100
           K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     ++ ++e + +++ ++e++ Lk+ei++Lq +q  llG+dL+ LslkeLq+LeqqL+++l  +++kK++ll+eq+e+++ +e+++  en++Lr+++e
  XP_021688428.1  77 ESARVEYKAEKQDSKEVDVLKEEIDKLQAKQLMLLGQDLTGLSLKELQHLEQQLNEGLLCVKEKKEHLLMEQLEQSRVQEQRAMLENETLRRQVE 171
                     4555777888999********************************************************************************98 PP

           K-box 100 e 100
                     e
  XP_021688428.1 172 E 172
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MGRGKIEIKR IENANSRQVT FSKRRTGLLK KAQELAILCD AEVAVIIFSN TGKLFEFSSS  60
GMKRTLARYN KCIDSTESAR VEYKAEKQDS KEVDVLKEEI DKLQAKQLML LGQDLTGLSL  120
KELQHLEQQL NEGLLCVKEK KEHLLMEQLE QSRVQEQRAM LENETLRRQV EELRCFFPST  180
DHSVPTYHEY YSVERKHSLV NNGSASPDTA YNCSMEKGDS DTTLHLGLPT DAYRKRKAPE  240
GESHSNDSGS QLVLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.14e-94MIKC_MADS family protein