PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688477.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 482aa MW: 53293.4 Da PI: 5.4187

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688477.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.8	9.2e-14	272	318	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR+++N+++ Lr+l+P++ +K + a+++ A++YIk+L XP_021688477.1 272 TKHFATERQRRQHLNDKYRALRDLVPNP-----TKSDRASVVGDAIDYIKEL 318 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MHGEIGCFDT NSMVQGADDG IGQVLQPPPP PPPMAGRTIN IHNGFEENLK MSTEELENLK 60 LSKEGLSYHH SYLHHQEEDA SAAREIQLQN HQQMAFNNTH LMQDSSNQVL AFTSSSLADA 120 STYTPTADLF NLFHLPRCSA SSLLPNSSIS FTNPTHTTPL GFAGDLPMTD TASASSILYD 180 PLFHLNLPPQ PPLFRELFQS LPPHGYSLPD SRGSSLFAGG EGGDDHVEGS GGGGEGGLYQ 240 DGDGEQQFDN GVLDFTWDMA CMGKDREAGK MTKHFATERQ RRQHLNDKYR ALRDLVPNPT 300 KSDRASVVGD AIDYIKELLR TVDELKILVE KKRCARERSK RLKTEDDSIG NTGNESCSTV 360 MKSIGDPDQS FNNGSLRSSW LQRKSKDTEI DVRIIDDEVT IKLVQRKKIN CLLYVSRVVD 420 ELKLDLHHVA GGQIGDYYSF LFNTKIYEGS SVYASAIANK LIEVVDRHYA STPSTTPSTS 480 CY

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MHGEIGCFDT NSMVQGADDG IGQVLQPPPP PPPMAGRTIN IHNGFEENLK MSTEELENLK  60
LSKEGLSYHH SYLHHQEEDA SAAREIQLQN HQQMAFNNTH LMQDSSNQVL AFTSSSLADA  120
STYTPTADLF NLFHLPRCSA SSLLPNSSIS FTNPTHTTPL GFAGDLPMTD TASASSILYD  180
PLFHLNLPPQ PPLFRELFQS LPPHGYSLPD SRGSSLFAGG EGGDDHVEGS GGGGEGGLYQ  240
DGDGEQQFDN GVLDFTWDMA CMGKDREAGK MTKHFATERQ RRQHLNDKYR ALRDLVPNPT  300
KSDRASVVGD AIDYIKELLR TVDELKILVE KKRCARERSK RLKTEDDSIG NTGNESCSTV  360
MKSIGDPDQS FNNGSLRSSW LQRKSKDTEI DVRIIDDEVT IKLVQRKKIN CLLYVSRVVD  420
ELKLDLHHVA GGQIGDYYSF LFNTKIYEGS SVYASAIANK LIEVVDRHYA STPSTTPSTS  480
CY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	3e-96	bHLH family protein