PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688584.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 306aa MW: 34644.8 Da PI: 6.9449

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58	1.6e-18	89	141	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le++Fe +++ e++ +LAk+lgL+ rq+ +WFqNrRa++k XP_021688584.1 89 KKRLNLEQVKALEKCFELGNKLEPERKMQLAKSLGLQPRQIAIWFQNRRARWK 141 4568889*********************************************9 PP
2	HD-ZIP_I/II	127.1	7.7e-41	87	179	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rl+ eqvk+LE++Fe +kLeperK++la++Lglqprq+a+WFqnrRAR+ktkqlEkdye+Lk+++ +lk++n++L++++++L++el++ XP_021688584.1 87 EKKKRLNLEQVKALEKCFELGNKLEPERKMQLAKSLGLQPRQIAIWFQNRRARWKTKQLEKDYEVLKKQFHSLKADNDALKAQNKKLHAELMA 179 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MQLIDMAFPP PPPPHHHGFI FHSQEDNDHL PSPSSLNSFP SSCPPQLFPG GGGHFMMKRS 60 MSVSGQEKCE EVNGDDDLSD DGSQLGEKKK RLNLEQVKAL EKCFELGNKL EPERKMQLAK 120 SLGLQPRQIA IWFQNRRARW KTKQLEKDYE VLKKQFHSLK ADNDALKAQN KKLHAELMAL 180 RGRESNCIEA NPKKETDQGS WSNASENSCD ANLDVSRNPV ATSPVSNSQL STKHPFSTSI 240 RPTSMTQLHQ SSSPRPDLQC LKVDQLVQEE NFCNIFNGMD EQQGFWPWPA EQHTPFSLNQ 300 NHFSNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	144	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01220.1	3e-70	HD-ZIP family protein