PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688773.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 475aa MW: 52884 Da PI: 10.6373

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.8	2.4e-08	9	57	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrw 44 grW t+E++ll av ++G+++W+++a+++ + t++ ck ++ XP_021688773.1 9 GRWGTWEELLLGGAVLRHGTRDWNLVAAELRartvcpYTFTPEACKTKY 57 9******************************555555555555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MMSTEVVTGR WGTWEELLLG GAVLRHGTRD WNLVAAELRA RTVCPYTFTP EACKTKYEDL 60 QQRYSGSKAM FEELRKQRMA ELRRALEVSE DSIGSLESKL EILKAERIND SNVGYDSSQT 120 ESLVQFQKSD GVESSSKETS KDGLSAGSFT QETRTNWSRE CQVPASVSVE DIETKPEVPM 180 SPKQEKVSNI VNLAETFFMG QGGSIRRRRG KRKRKGCSKD AKEGSVGESD FWGSTDVLSA 240 TRCKENSTSS SGQTGRGFGV DDKSKGSSKV GLTTNLMEIF NSIAENKCAS VFRRRLDSQK 300 RGRYKKMILQ HMDFDTLRSR IANHSITSVK EVYRDLLLLA NNALVFYSKT TREYKSALLL 360 RDIVTKSLRQ HLKDYISKIT ITLLSTTPSM LHPPVKARSA RPVNRKQLGK VSKSGNSIAK 420 TPNAVKKPSN VHSLPSAESV TMTKKGSGRP RKAGHGSTTQ PPENPPKGRK RTRAR

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MMSTEVVTGR WGTWEELLLG GAVLRHGTRD WNLVAAELRA RTVCPYTFTP EACKTKYEDL  60
QQRYSGSKAM FEELRKQRMA ELRRALEVSE DSIGSLESKL EILKAERIND SNVGYDSSQT  120
ESLVQFQKSD GVESSSKETS KDGLSAGSFT QETRTNWSRE CQVPASVSVE DIETKPEVPM  180
SPKQEKVSNI VNLAETFFMG QGGSIRRRRG KRKRKGCSKD AKEGSVGESD FWGSTDVLSA  240
TRCKENSTSS SGQTGRGFGV DDKSKGSSKV GLTTNLMEIF NSIAENKCAS VFRRRLDSQK  300
RGRYKKMILQ HMDFDTLRSR IANHSITSVK EVYRDLLLLA NNALVFYSKT TREYKSALLL  360
RDIVTKSLRQ HLKDYISKIT ITLLSTTPSM LHPPVKARSA RPVNRKQLGK VSKSGNSIAK  420
TPNAVKKPSN VHSLPSAESV TMTKKGSGRP RKAGHGSTTQ PPENPPKGRK RTRAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	213	RRRGKRK
2	468	474	GRKRTRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	5e-27	MYB_related family protein