PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021689424.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 240aa    MW: 27345.3 Da    PI: 6.8685
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021689424.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.51e-291666151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien  nrqvtfskRr+g+lKKA+ELSvLCdaevavi+fs+ gkl+e+ss
  XP_021689424.1 16 KRIENVNNRQVTFSKRRKGLLKKAKELSVLCDAEVAVIVFSNAGKLFEFSS 66
                    79***********************************************96 PP
2K-box44.28.1e-169618115100
           K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     ++   el+ Lk+e++ L+ +  +++G++L+ Ls+++L++Le+qL ++l ++ +kK +      +   ++++++ een++Lrk++ee
  XP_021689424.1  96 AQRAAELSALKDEVSHLRLSCLQMMGQQLHGLSFNDLRHLERQLSNGLHSVEDKKVQSCXXIKSLDFHQKQKIIEENERLRKQVEE 181
                     456789****************************************************9988888888889999*********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MTEERKTMGR GKIEIKRIEN VNNRQVTFSK RRKGLLKKAK ELSVLCDAEV AVIVFSNAGK  60
LFEFSSSSME NTLTRYCQSM DLEWLELSHD EHEIEAQRAA ELSALKDEVS HLRLSCLQMM  120
GQQLHGLSFN DLRHLERQLS NGLHSVEDKK VQSCXXIKSL DFHQKQKIIE ENERLRKQVE  180
ELQRTVKTAS YDGGEKEEES DSDISVTSLQ LGLSCDGNKK RKASKSESVC NDSRSQVGSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57390.14e-52MIKC_MADS family protein