PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021689673.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 336aa    MW: 38396.5 Da    PI: 9.8436
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021689673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.66.1e-182166147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l ++v+q+G  +W++Ia +++ gR++k+c++rw++ 
   XP_021689673.1 21 RGHWRPAEDEKLRQLVEQYGAQNWNSIADKLQ-GRSGKSCRLRWFNQ 66
                     899*****************************.***********996 PP
2Myb_DNA-binding59.76.4e-1973115145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      r ++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+
   XP_021689673.1  73 RRPFTEEEEERLLAAHRIHGNK-WALIARLFP-GRTDNAVKNHWH 115
                      679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDGPGAANSY DDAKNSSTCA RGHWRPAEDE KLRQLVEQYG AQNWNSIADK LQGRSGKSCR  60
LRWFNQLDPR INRRPFTEEE EERLLAAHRI HGNKWALIAR LFPGRTDNAV KNHWHVITAR  120
KQREQSKVSG KRSYQEGSSD SNTTTPNYFH PRKLRSQDLL SSGIGFENRT RVLEFRNPSA  180
DRIFSVVSSS NTSSPSWTFD PSYNSPSVVD HLSSRKLEGR DYFNNSSFYN TKNSSILDQQ  240
SIYGCYPNSS MHRSSTVWGL PNYRRVVPST FGYLKLGDEH ENHGMIKKEL ANFCYNSSTL  300
KNNKKVSNQA EQGDQESMIR HKEVQFIDFL GVGISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.13e-63MYB family protein