PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021689684.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 362aa    MW: 40366.3 Da    PI: 8.115
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021689684.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.85.7e-063859426
                    ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                    ++C+f+ + G C y ++CkF H+
  XP_021689684.1 38 RICKFWVK-GKCAYKNNCKFLHS 59
                    79******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MSTMDISMKT INPSKPFYAE TQQTRKSFQD QPRKPLQRIC KFWVKGKCAY KNNCKFLHSW  60
FQSGNGFSML ARLEGHKKSV VGVALPSGSD KLYTGSRDGT VRVWDGNSGK CDHVFNLGFE  120
IGSLICEGSW VFIGLPNLVR VWNLSSEGNK EFCLDGPIGQ VYALAVYKDL LFAGTANGDI  180
LVWRGSFEAN PFAKVATLRG HQKAVVCLNI GSGVNSLYSG SMDNTVTVWD LETLQCKQTL  240
NGHKDVVMSL LSWDQCLLTC SLDHTMKFWV AREGGKLEPV DTHEEKSGIL KVLGLQDAKG  300
KPIVLCSCND NCVRLYELDS FTEMDRIFAE KEVREIQRGP NGLFFTGDAA GVVTVWMWQQ  360
NK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.11e-130C3H family protein