PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021689940.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 313aa    MW: 34309.3 Da    PI: 6.1548
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021689940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.31.2e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd  l+++++ +G+g +W + +++ g++R++k+c++rw++yl
   XP_021689940.1 14 RGPWSPEEDATLKRYFETHGTGgNWIALPKKAGLKRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
2Myb_DNA-binding45.12.3e-1469111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +T+eEd+++  +  q+G++ W++I ++++ gRt++++k++w++
   XP_021689940.1  69 GGFTEEEDKIIFTLYSQMGSR-WSLITSHLP-GRTDNDVKNYWNT 111
                      569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGRAPCCDKA NVKRGPWSPE EDATLKRYFE THGTGGNWIA LPKKAGLKRC GKSCRLRWLN  60
YLRPDIKHGG FTEEEDKIIF TLYSQMGSRW SLITSHLPGR TDNDVKNYWN TKLKKKLLLG  120
GKTSLAIKNN TEIIAPSDNS NSTAPSFTPS LPCVFPKTET NSSLTFWDSL TQSSVTLPIS  180
SDAGYDQHLL NTAQSLSLDP VDQFSYTAGV MDNVSELGSN LINNHNIVSC SQEGSGISDS  240
SSISMDHNNK CLSMTDGVLM DSGFGYHYDP ATALLFEDNA GEVASTCCPN LAGFGYADIK  300
DQQGYNQNAI NQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.15e-67MYB family protein