PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021689975.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 255aa    MW: 29177.8 Da    PI: 8.4481
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021689975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.9e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd +l  +v+++G  +W+  +++ g+ R++k+c++rw +yl
   XP_021689975.1 14 KGTWTPEEDRKLMAYVTRYGCWNWRQLPKYAGLSRCGKSCRLRWMNYL 61
                     799*****************99************************97 PP
2Myb_DNA-binding543.7e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ T+eE++ ++++++ lG++ W++Ia+ ++ gRt++++k++w++ 
   XP_021689975.1  67 RGNYTKEEEDTIIRLHESLGNR-WSAIAAQLP-GRTDNEIKNHWHTN 111
                      899*******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MVRTPSCDKS GLKKGTWTPE EDRKLMAYVT RYGCWNWRQL PKYAGLSRCG KSCRLRWMNY  60
LRPNIKRGNY TKEEEDTIIR LHESLGNRWS AIAAQLPGRT DNEIKNHWHT NLKKRKQKDS  120
AKPDSCGLSR NKKSQKEDAK ANRIETVNPA TTRIMESFPL SPKQSTSDFS SLTADNTAVT  180
SSSCSDLKSE DEFAFLEAYE APSGNFWTEP FLADNYYMPS EFLTPLVDPL SPLSDGELLC  240
SYGVYEQYGV LNWQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113136KKRKQKDSAKPDSCGLSRNKKSQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-62MYB family protein