PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021690046.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 288aa    MW: 33003.1 Da    PI: 9.5418
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021690046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.72.7e-17444343
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                    i n+  r +t+ kR++g++KK +ELS+LCd++++vii++++
  XP_021690046.1  4 IMNDKSRMITYHKRKKGLIKKLQELSILCDVDACVIILGPN 44
                    8899***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MELIMNDKSR MITYHKRKKG LIKKLQELSI LCDVDACVII LGPNVNNRPI DVETWPTERY  60
DMRRIVNRFL SMGNERRKNR DLSSFFVARQ KKLDDEIVKL RKACLKAKFS TWDDRLNLWQ  120
YLELTLLDGV LGSKLEIATS RVLKSKGDNY LMFGSIDEGG SSNNKSFKSS SMASTFANSL  180
RQKNMELEVL KQEPLSFVNL SHQALPEMLP FNLDSLNSPM LMMMMTNGEG ISQFGGECSS  240
KRSWSPFKAS TNAMMMNNPR DHALSYWSKH AADRVDECFF SSTYSSIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58890.15e-17M-type_MADS family protein