PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690140.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 349aa MW: 39093 Da PI: 6.5149

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.6	1.2e-09	177	224	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_021690140.1 177 SHSLAERVRREKISERMKILQQLVPGC----DKVTGKALMLDEIINYVQSLQ 224 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MAAFSYQHHR FHLDSVFLPN TSIKNLSGFM EEENINTSCF SQFEPPELPL QIPLDVRFKD 60 TSRLDQSSML APCDNEPSVT KKQSTDNSTV VDKLESGEQV TQKVPPMDKK RKHANESSLN 120 SAQSKDARDG KSKKQKKCNI SELKDEDKRP KAEKKVPEEP PTGYIHVRAR RGQATDSHSL 180 AERVRREKIS ERMKILQQLV PGCDKVTGKA LMLDEIINYV QSLQNQVEFL SMKLASVNPL 240 FYNFGMDLDA LMVNSIEGLS SLASSSPPMQ QCNPTQPTDF ADAATTTTFA TANNYPFIDN 300 SSASILIQGQ RPNDFIHEVS GTDLLWNVDE QGQKFLNPSG FSNKLCSFH

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MAAFSYQHHR FHLDSVFLPN TSIKNLSGFM EEENINTSCF SQFEPPELPL QIPLDVRFKD  60
TSRLDQSSML APCDNEPSVT KKQSTDNSTV VDKLESGEQV TQKVPPMDKK RKHANESSLN  120
SAQSKDARDG KSKKQKKCNI SELKDEDKRP KAEKKVPEEP PTGYIHVRAR RGQATDSHSL  180
AERVRREKIS ERMKILQQLV PGCDKVTGKA LMLDEIINYV QSLQNQVEFL SMKLASVNPL  240
FYNFGMDLDA LMVNSIEGLS SLASSSPPMQ QCNPTQPTDF ADAATTTTFA TANNYPFIDN  300
SSASILIQGQ RPNDFIHEVS GTDLLWNVDE QGQKFLNPSG FSNKLCSFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	136	KKRKHANESSLNSAQSKDARDGKSKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-53	bHLH family protein