PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021690320.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family AP2
Protein Properties Length: 500aa    MW: 54737.6 Da    PI: 6.4445
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021690320.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.3e-17164213155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_021690320.1 164 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 213
                     78*******************......55************************997 PP
2AP2422.2e-13256306155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k++g
  XP_021690320.1 256 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKFNG 306
                     89********.7******5553..2.26**********99***********9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    
MLDLNLNAES SESILNSDSV ALIEKYQYQY PEGSGTSNSS IVNADASSND DSGSTRACAV  60
DASNSSSNNS SSLFTFNFDI LKVGSGGGNE NENVAVETKE FFPVSSGKGV GGYNGNSFGQ  120
GSSRDWIDLS FERQQDIGDG EVRVVQPPSQ QVRKSRRGPR SRSSQYRGVT FYRRTGRWES  180
HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF SLSDYEEDLK QMKNLTKEEF  240
VHILRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK YIYLGLFDSE VEAARAYDKA  300
AIKFNGREAV TNFEPSTYEG EMISEASNEG SEHNLDLNLG ISHSLGDGPK ENKGCLQFHL  360
GPYDMDSKSS RENSTALVAG DLPLKGPIMS DHPVLWNSVY PSFFPNEERA PDKRIELSSS  420
QGLPKWAWQM HGQVTATPMT LFSTAASSGF SFSATPPSAA ILPSKPLIPA AHNLCFTPPA  480
TMTTSATHFY CPVKPPQAPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-121AP2 family protein