PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690322.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 485aa MW: 53009.7 Da PI: 6.7392

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.5	6.1e-17	164	213	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_021690322.1 164 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 213 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MLDLNLNAES SESILNSDSV ALIEKYQYQY PEGSGTSNSS IVNADASSND DSGSTRACAV 60 DASNSSSNNS SSLFTFNFDI LKVGSGGGNE NENVAVETKE FFPVSSGKGV GGYNGNSFGQ 120 GSSRDWIDLS FERQQDIGDG EVRVVQPPSQ QVRKSRRGPR SRSSQYRGVT FYRRTGRWES 180 HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF SLSDYEEDLK QMKNLTKEEF 240 VHILRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK AYDKAAIKFN GREAVTNFEP 300 STYEGEMISE ASNEGSEHNL DLNLGISHSL GDGPKENKGC LQFHLGPYDM DSKSSRENST 360 ALVAGDLPLK GPIMSDHPVL WNSVYPSFFP NEERAPDKRI ELSSSQGLPK WAWQMHGQVT 420 ATPMTLFSTA ASSGFSFSAT PPSAAILPSK PLIPAAHNLC FTPPATMTTS ATHFYCPVKP 480 PQAPP

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MLDLNLNAES SESILNSDSV ALIEKYQYQY PEGSGTSNSS IVNADASSND DSGSTRACAV  60
DASNSSSNNS SSLFTFNFDI LKVGSGGGNE NENVAVETKE FFPVSSGKGV GGYNGNSFGQ  120
GSSRDWIDLS FERQQDIGDG EVRVVQPPSQ QVRKSRRGPR SRSSQYRGVT FYRRTGRWES  180
HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF SLSDYEEDLK QMKNLTKEEF  240
VHILRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK AYDKAAIKFN GREAVTNFEP  300
STYEGEMISE ASNEGSEHNL DLNLGISHSL GDGPKENKGC LQFHLGPYDM DSKSSRENST  360
ALVAGDLPLK GPIMSDHPVL WNSVYPSFFP NEERAPDKRI ELSSSQGLPK WAWQMHGQVT  420
ATPMTLFSTA ASSGFSFSAT PPSAAILPSK PLIPAAHNLC FTPPATMTTS ATHFYCPVKP  480
PQAPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	1e-110	AP2 family protein