PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690323.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 464aa MW: 50812.2 Da PI: 6.851

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.6	5.7e-17	164	213	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_021690323.1 164 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 213 78*****************......55**********************997 PP
2	AP2	42.2	2e-13	256	306	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k++g XP_021690323.1 256 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKFNG 306 89******.7**5553..2.26******99*********9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MLDLNLNAES SESILNSDSV ALIEKYQYQY PEGSGTSNSS IVNADASSND DSGSTRACAV 60 DASNSSSNNS SSLFTFNFDI LKVGSGGGNE NENVAVETKE FFPVSSGKGV GGYNGNSFGQ 120 GSSRDWIDLS FERQQDIGDG EVRVVQPPSQ QVRKSRRGPR SRSSQYRGVT FYRRTGRWES 180 HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF SLSDYEEDLK QMKNLTKEEF 240 VHILRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK YIYLGLFDSE VEAARAYDKA 300 AIKFNGREAV TNFEPSTYEG EMISEASNEG SEHNLDLNLG ISHSLGDGPK ENKGCLQFHL 360 GPYDMDSKSS RERAPDKRIE LSSSQGLPKW AWQMHGQVTA TPMTLFSTAA SSGFSFSATP 420 PSAAILPSKP LIPAAHNLCF TPPATMTTSA THFYCPVKPP QAPP

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MLDLNLNAES SESILNSDSV ALIEKYQYQY PEGSGTSNSS IVNADASSND DSGSTRACAV  60
DASNSSSNNS SSLFTFNFDI LKVGSGGGNE NENVAVETKE FFPVSSGKGV GGYNGNSFGQ  120
GSSRDWIDLS FERQQDIGDG EVRVVQPPSQ QVRKSRRGPR SRSSQYRGVT FYRRTGRWES  180
HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINF SLSDYEEDLK QMKNLTKEEF  240
VHILRRQSTG FSRGSSKYRG VTLHKCGRWE ARMGQFLGKK YIYLGLFDSE VEAARAYDKA  300
AIKFNGREAV TNFEPSTYEG EMISEASNEG SEHNLDLNLG ISHSLGDGPK ENKGCLQFHL  360
GPYDMDSKSS RERAPDKRIE LSSSQGLPKW AWQMHGQVTA TPMTLFSTAA SSGFSFSATP  420
PSAAILPSKP LIPAAHNLCF TPPATMTTSA THFYCPVKPP QAPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-112	AP2 family protein