PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021690332.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 208aa    MW: 22808.8 Da    PI: 6.1136
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021690332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26092.26e-292101195
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C++lr++C++dC+l++++     p++q++++ +v+k+FG++ ++++++++pe++r+ +++sl++eA  r+ +Pv+Gavg++++++++++q+
  XP_021690332.1   2 SCNGCRILRKGCSDDCTLRQCLhwidnPQAQANATIFVAKFFGRASLMSFISSVPENQRPSLFQSLFFEAVGRTVNPVSGAVGLLWTGNWHVCQT 96 
                     6*********************************************************************************************9 PP

          DUF260  91 kaela 95 
                     ++ ++
  XP_021690332.1  97 AVMTV 101
                     87665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MSCNGCRILR KGCSDDCTLR QCLHWIDNPQ AQANATIFVA KFFGRASLMS FISSVPENQR  60
PSLFQSLFFE AVGRTVNPVS GAVGLLWTGN WHVCQTAVMT VLHGGSLEPI LELDLDNFSE  120
SASFRPRNVC SGSKTTRTKR KRSGDDEGKL ELTNHELCFM YPADEKQLAE TPLEEESETT  180
TLGSGGFAST GKNCSSEGGE RKLLSLFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.15e-63LBD family protein