PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690441.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 338aa MW: 37552.3 Da PI: 9.3755

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690441.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.1	4.6e-18	18	97	2	73
trihelix 2 WtkqevlaLiearremeerlr.rgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 Wt +e+++Liea+r ++er r++ ++ +W++v ++++++g+ rs++qC++kw+nl ++ykk+++ ek+ ++ XP_021690441.1 18 WTVSETMVLIEAKRMDDERRMkRSSdsegrskPAELRWKWVEDYCWRKGCLRSQNQCNDKWDNLMRDYKKVRDYEKRIAE 97 ***********9666665523323334433999**************************************99754 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MADQGGNILI RDYRKGNWTV SETMVLIEAK RMDDERRMKR SSDSEGRSKP AELRWKWVED 60 YCWRKGCLRS QNQCNDKWDN LMRDYKKVRD YEKRIAEGRD GNEALSYWKL EKNERKEKNM 120 PSNMLLQVYE ALVEAVERRG TQKMVTTAAG GSGSNPNISC VVERPTVHPH PLPPLLQHQV 180 SVSIPVLPPP PSAAPQAQPP LSLPYSQPSL PAVEMCDGSD SDTSEHSGLP AKRRRRRGGS 240 GGGGGESSGG GASGSTPHEV GTAISRSASI IAEAIQACEE RKERRHRDLL SLHERRLKIE 300 QSMTELNRQG INGLVDAINN LANSILALAS HKNQSTPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	237	KRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-61	Trihelix family protein