PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690519.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 459aa MW: 50442.7 Da PI: 9.2038

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.3e-05	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_021690519.1 79 FVCEICNKGFQRDQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	12.3	0.00051	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_021690519.1 155 WKCEKCSKIYAVQSDWKAHSKTC 177 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MFPAAMSNST ALSEDASVST GNRVQDFCGL NPVVSTVSPQ QQQQQQPKIK KKRSLPGNPD 60 PDAEVIALSP KTLLATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR NSKEIKKRAY 120 VCPEPSCVHH HPSRALGDLT GIKKHYCRKH GEKKWKCEKC SKIYAVQSDW KAHSKTCGTR 180 EYRCDCGTLF SRKDSFITHR AFCDALAEES ARLSAHQLVT TNPTAQTLLL QNPQSHNSLF 240 PFTTHHHHQL SLNPWDPPPH NPSNPTQNPV QIKPETQHFQ LAPVFREPPP SLPTHQGLIT 300 SPFQSLSNPA VSASSNHLSA TALLQKAATV GATQTVGPSY TTQLDMGDSR AVSQAGGDSV 360 GQIPRQGSYL DHLAAWQKND RLTRDFLGLT GDGHAANGNG NVANGNGGVN VVINVREMLT 420 YTGGVGLQQY SERDHTLLKP HGFGCPRQPP PSSEAWGDC

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MFPAAMSNST ALSEDASVST GNRVQDFCGL NPVVSTVSPQ QQQQQQPKIK KKRSLPGNPD  60
PDAEVIALSP KTLLATNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR NSKEIKKRAY  120
VCPEPSCVHH HPSRALGDLT GIKKHYCRKH GEKKWKCEKC SKIYAVQSDW KAHSKTCGTR  180
EYRCDCGTLF SRKDSFITHR AFCDALAEES ARLSAHQLVT TNPTAQTLLL QNPQSHNSLF  240
PFTTHHHHQL SLNPWDPPPH NPSNPTQNPV QIKPETQHFQ LAPVFREPPP SLPTHQGLIT  300
SPFQSLSNPA VSASSNHLSA TALLQKAATV GATQTVGPSY TTQLDMGDSR AVSQAGGDSV  360
GQIPRQGSYL DHLAAWQKND RLTRDFLGLT GDGHAANGNG NVANGNGGVN VVINVREMLT  420
YTGGVGLQQY SERDHTLLKP HGFGCPRQPP PSSEAWGDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-130	C2H2 family protein