PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690526.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 238aa MW: 26218.6 Da PI: 6.9831

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	96.7	2.4e-30	4	107	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C++dC ++p++ p++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +PvyG+vg+++++++ +q+ XP_021690526.1 4 SCNGCRVLRKGCSDDCNIRPCLqwiksPDSQANATLFLAKFYGRAGLINLIEAGPPHLRPAVFRSLLYEACGRIVNPVYGSVGLLWSGNWAHCQA 98 6********************************************************************************************** PP DUF260 91 kaelallke 99 +++++l+++ XP_021690526.1 99 AVDAVLRGT 107 *99988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MRMSCNGCRV LRKGCSDDCN IRPCLQWIKS PDSQANATLF LAKFYGRAGL INLIEAGPPH 60 LRPAVFRSLL YEACGRIVNP VYGSVGLLWS GNWAHCQAAV DAVLRGTPIM QMPSAPDSPP 120 PHLIDPLKTY DIRHVSKDPN SLELNXIKNR TRFKGSVSNP SSPSEALCRV NHGELSFEQL 180 REPWLSQLAN GDSSRDDVSM FSVETVEDEP NRALKFNNLS DNGDEVGLDL TLGLVPVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68510.1	1e-82	LBD family protein