PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690564.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 350aa MW: 40108.9 Da PI: 4.9539

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.4	7.1e-36	43	134	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ e+++d+ +++++sws++g+sfvv+d+++f++++Lp+yFkh+nf+SFvRQLn+YgFkk++ ++ weF+++ F +g+k+ll++ XP_021690564.1 43 FLTKTLEMVDDPITNHVVSWSTEGTSFVVWDPHSFSTNLLPRYFKHNNFSSFVRQLNTYGFKKIDPDR---------WEFANEGFLRGQKHLLRT 128 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+k+ XP_021690564.1 129 IKRRKT 134 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MNPYYAVKEE YPGSSLSQSG DEPPITVLPQ PMEGLHDTGP PPFLTKTLEM VDDPITNHVV 60 SWSTEGTSFV VWDPHSFSTN LLPRYFKHNN FSSFVRQLNT YGFKKIDPDR WEFANEGFLR 120 GQKHLLRTIK RRKTPSQPLP QQQPLDACVE VGRFGLDREI DRLKRDKQFL MMELVKLRHQ 180 QQNTRAYIQA IEQRLQGTEI KQQQMMQFLA RAVQNPAFLQ QLAQNKDKRK ELEEAMTKKR 240 RRPIDQGTSG AESSYSGESR NAIKAEPLEL GDYGFEVSEL EALALEMQGY GRARRGQEEG 300 EEDIDPPESG DRELDEGFWD ELLSESNRGG EDEDVNVLAE RLGYLGSSPK

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MNPYYAVKEE YPGSSLSQSG DEPPITVLPQ PMEGLHDTGP PPFLTKTLEM VDDPITNHVV  60
SWSTEGTSFV VWDPHSFSTN LLPRYFKHNN FSSFVRQLNT YGFKKIDPDR WEFANEGFLR  120
GQKHLLRTIK RRKTPSQPLP QQQPLDACVE VGRFGLDREI DRLKRDKQFL MMELVKLRHQ  180
QQNTRAYIQA IEQRLQGTEI KQQQMMQFLA RAVQNPAFLQ QLAQNKDKRK ELEEAMTKKR  240
RRPIDQGTSG AESSYSGESR NAIKAEPLEL GDYGFEVSEL EALALEMQGY GRARRGQEEG  300
EEDIDPPESG DRELDEGFWD ELLSESNRGG EDEDVNVLAE RLGYLGSSPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	242	KRKELEEAMTKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-122	HSF family protein