PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690615.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 342aa MW: 38293.8 Da PI: 7.8359

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_021690615.1 14 KGPWSPEEDSKLKEYIERFGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.6	2.4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_021690615.1 69 GEFSDEEDRIICTLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE RFGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRIIC TLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMAM 120 APQSQRKPLP FPSPPNHQSS PLSSHSLFSL YKDSSASYPC CPDTVKPFSA GFDPISPIPS 180 NLLAKNSTTL ATNSSSLFQI QEGLVNPLQY YHPVKDNSNN NNNLLVFGSE ASCSSNSDGS 240 CSQISYGGRE IKQDDIGFQS YISNGYGENQ KFMFNYGNTS CNGSENLNQW AEKATGYFGE 300 TPPLEYDLED VKHLISSSSN TSCNNNFLLD ENKTQEKYMY YY

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE RFGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSDEEDRIIC TLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMAM  120
APQSQRKPLP FPSPPNHQSS PLSSHSLFSL YKDSSASYPC CPDTVKPFSA GFDPISPIPS  180
NLLAKNSTTL ATNSSSLFQI QEGLVNPLQY YHPVKDNSNN NNNLLVFGSE ASCSSNSDGS  240
CSQISYGGRE IKQDDIGFQS YISNGYGENQ KFMFNYGNTS CNGSENLNQW AEKATGYFGE  300
TPPLEYDLED VKHLISSSSN TSCNNNFLLD ENKTQEKYMY YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	7e-77	MYB family protein