PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021690689.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 164aa    MW: 18434 Da    PI: 8.5892
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021690689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260139.11.5e-4371061100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +Ca+Ck+lrr+C+kdC++apyfp+++p+kfa+vhk+FGasnv+k+l+++p ++r da++slvyeA ar+rdPvyG+vg i  lq+q++ l+ +la
  XP_021690689.1   7 PCASCKLLRRRCTKDCIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQRIPVHQRADAVRSLVYEASARVRDPVYGCVGAIYYLQNQVSDLEMQLA 101
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_021690689.1 102 EAQAE 106
                     99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MGGSPSPCAS CKLLRRRCTK DCIFAPYFPS DDPRKFAIVH KVFGASNVSK MLQRIPVHQR  60
ADAVRSLVYE ASARVRDPVY GCVGAIYYLQ NQVSDLEMQL AEAQAEILCI QMQQQPTITN  120
QYHGDVKSSQ FSVSNFNSSP QIFNFASSSN VIMQDPLKRE SFWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.15e-72LBD family protein