PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021690779.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 28002.9 Da PI: 9.0472

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021690779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	100.1	8.7e-32	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss XP_021690779.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSS 59 79***********************************************96 PP
2	K-box	92.6	6.7e-31	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +++ es+++e+ kLk++ e+Lqr+qR+llGedL++L+ keL+q+e++Le+slk++Rs++++++l+q+++lq+ke+ l e+n+aL+ kl+e XP_021690779.1 82 KPAKELESSYREYLKLKAKFESLQRTQRNLLGEDLGPLNTKELEQIERHLESSLKQVRSTRTQFMLDQLSDLQNKEQLLLEANRALTIKLDE 173 4567899*******************************************************************************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFSSI 60 SNMLQTLERY QKCSYGAVEV NKPAKELESS YREYLKLKAK FESLQRTQRN LLGEDLGPLN 120 TKELEQIERH LESSLKQVRS TRTQFMLDQL SDLQNKEQLL LEANRALTIK LDEISARTNL 180 RSSWESGEQS MPYGQQHTQS QELFQPLECN PTLQIGYNPV GTDQMIATTH AQQVNGFIPG 240 WML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-128	MIKC_MADS family protein