PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021690813.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 251aa    MW: 28697.4 Da    PI: 8.7747
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021690813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding63.25e-201461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT eEd+ll ++vk++G g+W+++ar+ g++R++k+c++rw +yl
   XP_021690813.1 14 KGPWTLEEDKLLSEYVKLHGEGRWSSVARCAGLNRSGKSCRLRWVNYL 61
                     79********************************************97 PP
2Myb_DNA-binding51.91.7e-1667111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg  T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++
   XP_021690813.1  67 RGQITPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 111
                      7888******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MMGWGDFPQQ GWRKGPWTLE EDKLLSEYVK LHGEGRWSSV ARCAGLNRSG KSCRLRWVNY  60
LRPGLKRGQI TPQEEGIIIE LHALWGNKWS TIARYLPGRT DNEIKNYWRT HFMKREKSSN  120
QKQEKQKAQV LNKKLQLQQE QEQQKQLGVD KTKAIDITNE GKIHEAQEKQ EMVCMYPTLG  180
DHCLPVMSQD VASWADFVVD DGLLWGGLWN LDDQVCHTSN CSKIAKQNQA TAFSFGGGSN  240
NAYSSTGGYI F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30210.11e-67MYB family protein