PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021690824.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 417aa    MW: 46778.1 Da    PI: 7.9009
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021690824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS338.71e-103384161374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lLl+ A++ ssg+ ++a+a+L+++sel+s +gd+mqRlaa f+ ALa+rl++ +++lykal+  +++    +++ +a +lf  ++P+l f++
  XP_021690824.1  38 LIQLLLKGAKHASSGNVHRADACLSEISELSSMSGDSMQRLAAQFASALATRLVKRWPGLYKALNHHQKP---RIDVDQAKTLFARAFPFLCFAY 129
                     689***************************************************************9999...6888888999************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     ++  +++++a+++e+ +Hi+D++ + +  W+++l++La  p+gpp+l+iT ++s    ++  l ++g+ L k Ae+l++pf+fn+l +  l +l+
  XP_021690824.1 130 MVITRTLVQAMANEHVIHIVDLSSGDPKLWVPFLHSLAHLPNGPPHLKITCLNS----NRAILDKLGQSLVKEAESLDMPFQFNPL-SIGLRELS 219
                     ******************************************************....99*************************5.889***** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrll..............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                      ++L+v++gEala  ++l+lh ll               +sv++ ++ +++L +++s+sPk++ +veqe++hn  ++++rf+e l+yysa+fds+
  XP_021690824.1 220 GDMLKVRSGEALAFVSILNLHVLLaeddqvdvhfggtkFNSVKSCKPLSNFLTMIRSMSPKLLFLVEQEVNHNLDRLVDRFVEGLHYYSAVFDSI 314
                     ***********************************998666777778999********************************************* PP

            GRAS 272 eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                     +a+ ++   e r+ +E++ +grei+n+vaceg er+erhe+++kW  rl++aGFkp++l ++ +++ k ++  ++ +gy++ +e+ sl+++W++r
  XP_021690824.1 315 DATSGNLGgEGRMILEEM-FGREIENIVACEGLERFERHERYGKWAIRLGQAGFKPIRLWYNFNEDTKQMVDGFG-KGYKIASEKTSLMICWHER 407
                     999777775777777777.********************************************************.9****************** PP

            GRAS 366 pLvsvSaWr 374
                     pL++v+aW+
  XP_021690824.1 408 PLYAVTAWT 416
                     ********6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MSSLKPSLKP DVTLSLALSP SPAHDHEILK PEERGIRLIQ LLLKGAKHAS SGNVHRADAC  60
LSEISELSSM SGDSMQRLAA QFASALATRL VKRWPGLYKA LNHHQKPRID VDQAKTLFAR  120
AFPFLCFAYM VITRTLVQAM ANEHVIHIVD LSSGDPKLWV PFLHSLAHLP NGPPHLKITC  180
LNSNRAILDK LGQSLVKEAE SLDMPFQFNP LSIGLRELSG DMLKVRSGEA LAFVSILNLH  240
VLLAEDDQVD VHFGGTKFNS VKSCKPLSNF LTMIRSMSPK LLFLVEQEVN HNLDRLVDRF  300
VEGLHYYSAV FDSIDATSGN LGGEGRMILE EMFGREIENI VACEGLERFE RHERYGKWAI  360
RLGQAGFKPI RLWYNFNEDT KQMVDGFGKG YKIASEKTSL MICWHERPLY AVTAWTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-105GRAS family protein