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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_021690824.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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| Family | GRAS | ||||||||
| Protein Properties | Length: 417aa MW: 46778.1 Da PI: 7.9009 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 338.7 | 1e-103 | 38 | 416 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
l++lLl+ A++ ssg+ ++a+a+L+++sel+s +gd+mqRlaa f+ ALa+rl++ +++lykal+ +++ +++ +a +lf ++P+l f++
XP_021690824.1 38 LIQLLLKGAKHASSGNVHRADACLSEISELSSMSGDSMQRLAAQFASALATRLVKRWPGLYKALNHHQKP---RIDVDQAKTLFARAFPFLCFAY 129
689***************************************************************9999...6888888999************ PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
++ +++++a+++e+ +Hi+D++ + + W+++l++La p+gpp+l+iT ++s ++ l ++g+ L k Ae+l++pf+fn+l + l +l+
XP_021690824.1 130 MVITRTLVQAMANEHVIHIVDLSSGDPKLWVPFLHSLAHLPNGPPHLKITCLNS----NRAILDKLGQSLVKEAESLDMPFQFNPL-SIGLRELS 219
******************************************************....99*************************5.889***** PP
GRAS 191 leeLrvkpgEalaVnlvlqlhrll..............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
++L+v++gEala ++l+lh ll +sv++ ++ +++L +++s+sPk++ +veqe++hn ++++rf+e l+yysa+fds+
XP_021690824.1 220 GDMLKVRSGEALAFVSILNLHVLLaeddqvdvhfggtkFNSVKSCKPLSNFLTMIRSMSPKLLFLVEQEVNHNLDRLVDRFVEGLHYYSAVFDSI 314
***********************************998666777778999********************************************* PP
GRAS 272 eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
+a+ ++ e r+ +E++ +grei+n+vaceg er+erhe+++kW rl++aGFkp++l ++ +++ k ++ ++ +gy++ +e+ sl+++W++r
XP_021690824.1 315 DATSGNLGgEGRMILEEM-FGREIENIVACEGLERFERHERYGKWAIRLGQAGFKPIRLWYNFNEDTKQMVDGFG-KGYKIASEKTSLMICWHER 407
999777775777777777.********************************************************.9****************** PP
GRAS 366 pLvsvSaWr 374
pL++v+aW+
XP_021690824.1 408 PLYAVTAWT 416
********6 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 417 aa Download sequence |
MSSLKPSLKP DVTLSLALSP SPAHDHEILK PEERGIRLIQ LLLKGAKHAS SGNVHRADAC 60 LSEISELSSM SGDSMQRLAA QFASALATRL VKRWPGLYKA LNHHQKPRID VDQAKTLFAR 120 AFPFLCFAYM VITRTLVQAM ANEHVIHIVD LSSGDPKLWV PFLHSLAHLP NGPPHLKITC 180 LNSNRAILDK LGQSLVKEAE SLDMPFQFNP LSIGLRELSG DMLKVRSGEA LAFVSILNLH 240 VLLAEDDQVD VHFGGTKFNS VKSCKPLSNF LTMIRSMSPK LLFLVEQEVN HNLDRLVDRF 300 VEGLHYYSAV FDSIDATSGN LGGEGRMILE EMFGREIENI VACEGLERFE RHERYGKWAI 360 RLGQAGFKPI RLWYNFNEDT KQMVDGFGKG YKIASEKTSL MICWHERPLY AVTAWTC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G50420.1 | 1e-105 | GRAS family protein | ||||




