PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021690843.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 252aa    MW: 29172.2 Da    PI: 8.479
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021690843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.26.1e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+ rqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  XP_021690843.1  9 KRIENKISRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
                    79***********************************************96 PP
2K-box99.55e-33811738100
           K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     +++++++ +++ e  kL ++ie L+r++R+l GedL+++sl+eLq+Leqq++++lk++R++Kn+l+ ++i+elqkke++l+e+n++L+kk++e
  XP_021690843.1  81 ANDSEQQGNWSLECPKLMARIEILERSLRNLAGEDLDPMSLRELQHLEQQIDNGLKRVRARKNQLYNQSISELQKKERALHEQNNMLSKKVKE 173
                     46788899**********************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MGRGRVQLKR IENKISRQVT FSKRRTGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD  60
SSMERILERY ERCSFTERQV ANDSEQQGNW SLECPKLMAR IEILERSLRN LAGEDLDPMS  120
LRELQHLEQQ IDNGLKRVRA RKNQLYNQSI SELQKKERAL HEQNNMLSKK VKENEKTMAE  180
QANWEQQNLG QNQTSFMPPP PPPPMQSLPS LTIGASGTLQ TREFMNEDEE AIAQIQPNTI  240
QIPPWMLRHV NE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.12e-86MIKC_MADS family protein