PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691222.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 250aa MW: 28190.7 Da PI: 8.7783

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691222.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	112	4.2e-35	17	114	1	98
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCa+Ck++r+kC +dC+lapyfpa+++++f++vhk+FG+snv+kl+++++ee+r+++++slv+eA +r++dP+ G +g ++k+q++l+ k++ + XP_021691222.1 17 ACASCKHQRKKCGEDCILAPYFPADRSREFQAVHKVFGVSNVMKLVRSVKEEDRKTVADSLVWEAFCRQNDPILGPLGEYRKIQEELKLFKNQSQ 111 7***************************************************************************************9998877 PP DUF260 96 llk 98 ++ XP_021691222.1 112 TQT 114 665 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MQRSSSITNS GTVAHPACAS CKHQRKKCGE DCILAPYFPA DRSREFQAVH KVFGVSNVMK 60 LVRSVKEEDR KTVADSLVWE AFCRQNDPIL GPLGEYRKIQ EELKLFKNQS QTQTQILNQN 120 QLVQQPECMM HKATTPGMVA WNNGTNGVNN KGIEGGLANN NNNNNMVNFS HDNGNIIYSS 180 YPLNYVQGPQ KVMKQEKDVN PRLLPLQQPQ QQHHHSVTAG FNHQQQYYLP GQFGYMNGKT 240 MDNTAWEAGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	6e-48	LBD family protein