PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691400.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WOX

Protein Properties

Length: 253aa MW: 29039.3 Da PI: 5.8584

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.9	1.3e-21	103	163	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + n +ps+++++e+++kl +++e++V++WFqNrRa+ k+ XP_021691400.1 103 RQRWTPTPLQLQILERIFDMgNGTPSKQKIKEITTKLsqhgQISESNVYNWFQNRRARSKR 163 89***************99************************************97 PP
2	Wus_type_Homeobox	100.4	1.3e-32	102	165	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe++++ G tP+k++i++it++L+++G+i++ NV++WFQNr+aR+++kq XP_021691400.1 102 ARQRWTPTPLQLQILERIFDMGNGTPSKQKIKEITTKLSQHGQISESNVYNWFQNRRARSKRKQ 165 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MMDWENNQEN QYQQQENQNQ RENRNGNNIT SVNGNNGMLY IKVMTDEQLE TLRKQIVVYA 60 TICEQLVEMH KTLSAQQDLA GGRLGNLYCD PLMASGGHKI TARQRWTPTP LQLQILERIF 120 DMGNGTPSKQ KIKEITTKLS QHGQISESNV YNWFQNRRAR SKRKQLVASS NNAESEVETE 180 VDSLNEKTKP EIFHSQQSHP RPDDLCFQST EINSELHFLG VLPNQRDDHL PGKMEVLGSY 240 IHYDQAEDYG MAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	165	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-103	WOX family protein