PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021691446.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 213aa    MW: 24375.1 Da    PI: 10.4226
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021691446.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.61.4e-221862549
                    SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    n+sn qvtfskRr g++KKA+EL++LC++eva+i+fs+  k++ +
  XP_021691446.1 18 NESNLQVTFSKRRSGLFKKASELCTLCGVEVAIIVFSPGKKVFSF 62
                    89************************************9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVRKSKGRQK VEMVKMPNES NLQVTFSKRR SGLFKKASEL CTLCGVEVAI IVFSPGKKVF  60
SFGHPGVEPV IERFINRTTP QTSPTMQLIE AHRNASVREL NVRLTQVSNQ LEMEKKKTEE  120
LNHTRKENKS QCWWEAPIEE LNLPQLEQLK VSLEHLKKNV ARQVDKLLIQ NSQVRHQQFY  180
ASTSGAAVLP FESKNVVFNP DKVPSHGYGR GFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.19e-70M-type_MADS family protein