PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691580.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 328aa MW: 37005.1 Da PI: 7.0171

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	9.9e-19	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_021691580.1 36 RGPWTVEEDFKLINYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 83 89********************************************97 PP
2	Myb_DNA-binding	49.4	1e-15	89	132	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++ +++++ ++G++ W++Ia++++ gRt++++k++w++ XP_021691580.1 89 RGNITLEEQLMILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 132 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MMMMDVKGRN SNLKSSSSSS SSTTQSEEEM VGDLRRGPWT VEEDFKLINY IATHGEGRWN 60 SLARCAGLKR TGKSCRLRWL NYLRPDVRRG NITLEEQLMI LELHSRWGNR WSKIAQHLPG 120 RTDNEIKNYW RTRVQKHAKQ LKCDVNSKQF KDTMKYLWMP RLIERIQAAN TTATSISTAN 180 TAAPTTGVAT ASTTTDPNHH NHLIINNTDM GNGQWAAVAH GGAGFVANEF GVAQVTPSTY 240 TTPETSSTAA SSDSFGTQVS QNDYYSMNPD YFQSGQVGYS ELMISPSGYF NQVMDFQAME 300 QNNHQLWVDG GDPSDNLWNV EEFWFNNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	5e-86	MYB family protein