PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021691667.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 211aa    MW: 22890.2 Da    PI: 9.1826
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021691667.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26095.55.8e-302102196
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C + C+l+ ++     p++q +++ +++k+FG+s +++l++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+
  XP_021691667.1   2 SCNGCRVLRKGCGETCILRSCLhwispPEAQGNATLFLAKFFGRSDLMSLISAVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWSGNWHVCQA 96 
                     6*************************99999**************************************************************** PP

          DUF260  91 kaelal 96 
                     ++e++l
  XP_021691667.1  97 AVETVL 102
                     *99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MSCNGCRVLR KGCGETCILR SCLHWISPPE AQGNATLFLA KFFGRSDLMS LISAVPESQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLWSGN WHVCQAAVET VLSGGILRPI PGIHSGVLAP  120
NYDESSSVSF SAEACELRNT WKQSKPYTNM ARENQASVFN LSLPPKLLAS GRAGREKKGR  180
DAVSFYTKES SETTTFKSSG GDRKKLLNLF V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.12e-66LBD family protein