PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691812.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 520aa MW: 57270.4 Da PI: 6.4558

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691812.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.6	0.00012	412	444	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A++YIk Lq XP_021691812.1 412 DRITALQQIVSPF-----GKTDTASVLLEAIQYIKFLQ 444 6788888888887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MAQECSESSV AISSSTPFAA VAGWWDLHHA SSLPPWTNNS NLSATTCSPW HQQQPNPSSN 60 SSCEEDVSMS TSFTNASNHS GLTVESSRRL VEPAASSPTE FMGEHASDSQ LWSHILLGVG 120 SNGELHNIQD VGENLLDALS SKSISSGIFE PACDYLKKMD DNNWEFTNSP SINNLDHKHI 180 NGFSTDHLSL VESERVTKLS NLVSNWTIAP PDPGVLVSRE TIDPITCNIS LSSSANHYSQ 240 PQTYSNSASC ETEVNRKSGF LSCYDGHDLK LENEHCQVEA PSYIFRRSFN NGNGVGYNIG 300 LSSGLVVADN SKHYYGMPDN TCTSARNFTD GIGCNGRFNK PSIDIEGHKY CFKSLNLSDS 360 RKQKTGRGQG NTSEGKKKRS DDKSEMVLKK PKHESSTVSS AKMQVPKVKL GDRITALQQI 420 VSPFGKTDTA SVLLEAIQYI KFLQEQVQLL SSPYMKNNSR KDPWGVLEKK DEGDVKVDLR 480 SRGLCLVPTS CTPQIYHENT GSDYWTPTYR SGCLYRLNNY

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MAQECSESSV AISSSTPFAA VAGWWDLHHA SSLPPWTNNS NLSATTCSPW HQQQPNPSSN  60
SSCEEDVSMS TSFTNASNHS GLTVESSRRL VEPAASSPTE FMGEHASDSQ LWSHILLGVG  120
SNGELHNIQD VGENLLDALS SKSISSGIFE PACDYLKKMD DNNWEFTNSP SINNLDHKHI  180
NGFSTDHLSL VESERVTKLS NLVSNWTIAP PDPGVLVSRE TIDPITCNIS LSSSANHYSQ  240
PQTYSNSASC ETEVNRKSGF LSCYDGHDLK LENEHCQVEA PSYIFRRSFN NGNGVGYNIG  300
LSSGLVVADN SKHYYGMPDN TCTSARNFTD GIGCNGRFNK PSIDIEGHKY CFKSLNLSDS  360
RKQKTGRGQG NTSEGKKKRS DDKSEMVLKK PKHESSTVSS AKMQVPKVKL GDRITALQQI  420
VSPFGKTDTA SVLLEAIQYI KFLQEQVQLL SSPYMKNNSR KDPWGVLEKK DEGDVKVDLR  480
SRGLCLVPTS CTPQIYHENT GSDYWTPTYR SGCLYRLNNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	7e-61	bHLH family protein