PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021691872.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 441aa MW: 48709 Da PI: 6.6953

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021691872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.1	3e-16	133	178	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ XP_021691872.1 133 RGHWRPAEDTKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 178 899***************************.*********996 PP
2	Myb_DNA-binding	57.3	3.7e-18	185	228	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l +a++++G++ W+ Iar ++ gRt++ +k++w+ XP_021691872.1 185 RRAFTEEEEERLMQAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 228 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MASKCAIYST SENNPICYSS SSASSSSSSL CSSAGMVLAD IGSLSLSPNY GVIPPASSSH 60 EMEIGRASWV FPFMGSHQSS DVVMEGKGSD CSDAFGENND TVNQNANSTE NPNNENMNSG 120 KETDSGQSKL CARGHWRPAE DTKLKELVAL YGPQNWNLIA EKLEGRSGKS CRLRWFNQLD 180 PRINRRAFTE EEEERLMQAH RLYGNKWAMI ARLFPGRTDN AVKNHWHVIM ARKYREQSSA 240 YRRRKLNQSV YRRAEETSSF VCRDPGTRAE PPQYCLSIPN AGGLSNLSPY PIGTFHSGVD 300 YGLNGSPHMT SGEEAVSSIP VHVPLPWFCA QQTPFDFFLG PKSNDMIGMF SHNRSWDRPS 360 DEPHISGFYP QLHNPYITAM QQSNYQNPYY FSADSTASTP PKVSATEPSP SPSSSVAENT 420 RTGHLETIPP PFIDFLGVGA T

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MASKCAIYST SENNPICYSS SSASSSSSSL CSSAGMVLAD IGSLSLSPNY GVIPPASSSH  60
EMEIGRASWV FPFMGSHQSS DVVMEGKGSD CSDAFGENND TVNQNANSTE NPNNENMNSG  120
KETDSGQSKL CARGHWRPAE DTKLKELVAL YGPQNWNLIA EKLEGRSGKS CRLRWFNQLD  180
PRINRRAFTE EEEERLMQAH RLYGNKWAMI ARLFPGRTDN AVKNHWHVIM ARKYREQSSA  240
YRRRKLNQSV YRRAEETSSF VCRDPGTRAE PPQYCLSIPN AGGLSNLSPY PIGTFHSGVD  300
YGLNGSPHMT SGEEAVSSIP VHVPLPWFCA QQTPFDFFLG PKSNDMIGMF SHNRSWDRPS  360
DEPHISGFYP QLHNPYITAM QQSNYQNPYY FSADSTASTP PKVSATEPSP SPSSSVAENT  420
RTGHLETIPP PFIDFLGVGA T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-77	MYB family protein