PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021692124.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 405aa MW: 45159.8 Da PI: 8.1086

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021692124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.3	3.4e-07	230	252	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H XP_021692124.1 230 HYCQVCGKGFKRDANLRMHMRAH 252 68*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MKMISEAGSC FPNLAHGGLQ IYPGSESVVS TSNLEANSSS ETHSSSLLYS LSLLKDKVHQ 60 VQCLVSILIS PDDHHHQAQQ PESTSLAIAR MATMIQEIIV TASSMVFTCQ QMAIGSNSAA 120 ANNNNTDELH HEAQANKVQE NGLLQPNFGG NNIAQERGQS SFFPSESFEF WYGDNYNNRG 180 MLALDSNQKV EGKEFSQGGS EKSAEGKSLL VKNYDIIELD AADLLAKYTH YCQVCGKGFK 240 RDANLRMHMR AHGDEYKTTA ALSNPMKNNS SREIMGDNDN ESWSTKLPRK YSCPHEGCRW 300 NQKHAKFQPL KSMICAKNHY KRSHCPKMYV CKRCNRKQFS VLSDLRTHEK HCGDLKWQCS 360 CGTTFSRKDK LMGHVALFVG HTPAITSFPK PPAKVENQVQ LDDRG

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MKMISEAGSC FPNLAHGGLQ IYPGSESVVS TSNLEANSSS ETHSSSLLYS LSLLKDKVHQ  60
VQCLVSILIS PDDHHHQAQQ PESTSLAIAR MATMIQEIIV TASSMVFTCQ QMAIGSNSAA  120
ANNNNTDELH HEAQANKVQE NGLLQPNFGG NNIAQERGQS SFFPSESFEF WYGDNYNNRG  180
MLALDSNQKV EGKEFSQGGS EKSAEGKSLL VKNYDIIELD AADLLAKYTH YCQVCGKGFK  240
RDANLRMHMR AHGDEYKTTA ALSNPMKNNS SREIMGDNDN ESWSTKLPRK YSCPHEGCRW  300
NQKHAKFQPL KSMICAKNHY KRSHCPKMYV CKRCNRKQFS VLSDLRTHEK HCGDLKWQCS  360
CGTTFSRKDK LMGHVALFVG HTPAITSFPK PPAKVENQVQ LDDRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-104	C2H2 family protein